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Protein
Submitted name:

Mitochondrial ribosomal protein L3

Gene

mRpL3

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • sensory perception of pain Source: FlyBase
  • translation Source: FlyBase
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-DME-5389840. Mitochondrial translation elongation.
R-DME-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Submitted name:
Mitochondrial ribosomal protein L3Imported
Gene namesi
Name:mRpL3Imported
ORF Names:CG8288Imported, Dmel_CG8288Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome X

Organism-specific databases

FlyBaseiFBgn0030686. mRpL3.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial large ribosomal subunit Source: FlyBase
  • mitochondrial small ribosomal subunit Source: FlyBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ9VXQ0.

Expressioni

Gene expression databases

BgeeiQ9VXQ0.
ExpressionAtlasiQ9VXQ0. differential.
GenevisibleiQ9VXQ0. DM.

Interactioni

Protein-protein interaction databases

IntActiQ9VXQ0. 1 interaction.
MINTiMINT-950251.
STRINGi7227.FBpp0073906.

Structurei

3D structure databases

ProteinModelPortaliQ9VXQ0.
SMRiQ9VXQ0. Positions 45-359.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3141. Eukaryota.
COG0087. LUCA.
GeneTreeiENSGT00390000011422.
InParanoidiQ9VXQ0.
KOiK02906.
OMAiKDEPWPL.
PhylomeDBiQ9VXQ0.

Family and domain databases

InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9VXQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMRSVINQLL GLRLSGNSSV LVTQVRDKGH LSRPRLRNPQ WFLRKEITKY
60 70 80 90 100
NDLMTAENKQ FVNEVGTNNF GVPAVIKDSL VKTAGPTANE AVWTPNLRRC
110 120 130 140 150
GVIARKIGQY PLWLKNGERI RTTLLQIVDN HVIKYIPPEE YLPAQVPTVA
160 170 180 190 200
NLHKRGCILV GSETTNPALL TKEYAGIFRN SGVLPKKNLA RFIVSPEAQL
210 220 230 240 250
APGTPLNVNH FRVGDFVDVR GKTVDHGFQG VVKRHGFKGM PASHGVTKTH
260 270 280 290 300
RRAGNIGGGG EKGRVWPGTK MPGHMGNRWR IIKGLRVWRI NTKYNVMWVQ
310 320 330 340 350
GSSVAGPTGG LVYIYDTILP TRKNKEAPPF PTFYGEPQQD GDDVWYEQVH
360
NFKSESITYE NE
Length:362
Mass (Da):40,553
Last modified:October 1, 2002 - v2
Checksum:i45FABC3EDBD487B3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF48508.2.
RefSeqiNP_511166.2. NM_078611.4.

Genome annotation databases

EnsemblMetazoaiFBtr0074090; FBpp0073906; FBgn0030686.
GeneIDi32523.
KEGGidme:Dmel_CG8288.
UCSCiCG8288-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF48508.2.
RefSeqiNP_511166.2. NM_078611.4.

3D structure databases

ProteinModelPortaliQ9VXQ0.
SMRiQ9VXQ0. Positions 45-359.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9VXQ0. 1 interaction.
MINTiMINT-950251.
STRINGi7227.FBpp0073906.

Proteomic databases

PaxDbiQ9VXQ0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0074090; FBpp0073906; FBgn0030686.
GeneIDi32523.
KEGGidme:Dmel_CG8288.
UCSCiCG8288-RA. d. melanogaster.

Organism-specific databases

CTDi11222.
FlyBaseiFBgn0030686. mRpL3.

Phylogenomic databases

eggNOGiKOG3141. Eukaryota.
COG0087. LUCA.
GeneTreeiENSGT00390000011422.
InParanoidiQ9VXQ0.
KOiK02906.
OMAiKDEPWPL.
PhylomeDBiQ9VXQ0.

Enzyme and pathway databases

ReactomeiR-DME-5389840. Mitochondrial translation elongation.
R-DME-5419276. Mitochondrial translation termination.

Miscellaneous databases

GenomeRNAii32523.
NextBioi778911.

Gene expression databases

BgeeiQ9VXQ0.
ExpressionAtlasiQ9VXQ0. differential.
GenevisibleiQ9VXQ0. DM.

Family and domain databases

InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  3. Cited for: GENOME REANNOTATION.
    Strain: BerkeleyImported.
  4. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
    Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
    Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  5. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
    Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
    Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  6. "Combined evidence annotation of transposable elements in genome sequences."
    Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
    PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  7. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
    Smith C.D., Shu S., Mungall C.J., Karpen G.H.
    Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  8. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.

Entry informationi

Entry nameiQ9VXQ0_DROME
AccessioniPrimary (citable) accession number: Q9VXQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: May 11, 2016
This is version 112 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.