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Q9VW96 (Q9VW96_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
CG17147 EMBL AAF49053.3
Submitted name:
RT07487p EMBL ADF80704.1
Gene names
Name:Su(var)3-3 FlyBase FBgn0259698 FlyBase FBgn0260397
Synonyms:Su(var)3-3-RA EMBL ADF80704.1
ORF Names:CG17147 FlyBase FBgn0260393, Dmel_CG17147 EMBL AAF49053.3
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length338 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processchitin metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionchitin binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VW96 [UniParc].

Last modified July 5, 2004. Version 3.
Checksum: EC1F36AAB83F35C3

FASTA33837,654
        10         20         30         40         50         60 
MTPNLKLGVL LGCVLLLATV ALSASVGEYE ELCRLFKNGT KVRKPGTCDQ YIQCYDGNGT 

        70         80         90        100        110        120 
VLTCPSNQSF NPSKGSCVDT LANSNKYCGN RCEGLDGEWV ADPTECHKYF YCMNGVPLAG 

       130        140        150        160        170        180 
MCPVGQHFDE RSQSCLYGVD SMCVDVNNIC ELVAENTKFR NEKDCAYYYE CDKTGNHASK 

       190        200        210        220        230        240 
SCTVTSKKRE YFDVESGNCV EANKVECTAH SKENVCTSST TMTFKSDQAT CRGYFVCKAL 

       250        260        270        280        290        300 
YPVADLDPLW TQCPEGYFFD EDRQLCANPT TVVCTHNRCD GRGTMLVTSS SNNCHNYIRC 

       310        320        330 
VDNKEVTEET CHWDHFFDET VEACSSKIIY DKCCDGRD

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014296 Genomic DNA. Translation: AAF49053.3.
BT124789 mRNA. Translation: ADF80704.1.
RefSeqNP_649193.2. NM_140936.2.
UniGeneDm.27184.

3D structure databases

ProteinModelPortalQ9VW96.
SMRQ9VW96. Positions 89-149.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9VW96.

Protein family/group databases

CAZyCBM14. Carbohydrate-Binding Module Family 14.

Proteomic databases

PRIDEQ9VW96.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0074824; FBpp0074593; FBgn0260393.
GeneID40216.
KEGGdme:Dmel_CG17147.
NMPDRfig|7227.3.peg.10686.
UCSCCG17147-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0260393. CG17147.

Phylogenomic databases

GeneTreeEMGT00050000002051.
InParanoidQ9VW96.
OMANNCHNYI.
OrthoDBEOG4RXWG0.
PhylomeDBQ9VW96.

Gene expression databases

ArrayExpressQ9VW96.
BgeeQ9VW96.

Family and domain databases

InterProIPR002557. Chitin-bd_dom.
[Graphical view]
Gene3DG3DSA:2.170.140.10. Chitin-bd_dom. 4 hits.
PfamPF01607. CBM_14. 4 hits.
[Graphical view]
SMARTSM00494. ChtBD2. 5 hits.
[Graphical view]
SUPFAMSSF57625. Chitin_bind_PerA. 4 hits.
PROSITEPS50940. CHIT_BIND_II. 5 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio817617.

Entry information

Entry nameQ9VW96_DROME
AccessionPrimary (citable) accession number: Q9VW96
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: July 5, 2004
Last modified: January 25, 2012
This is version 77 of the entry and version 3 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info