Unreviewed, UniProtKB/TrEMBL Q9VW30 (Q9VW30_DROME)

Names and origin

Protein names

Submitted name:
    LDLa domain containing chitin binding protein 1, isoform B EMBL AAF49122.1
    EC=3.5.1.41

Gene names

Name:	LCBP1 EMBL AAF49122.1
ORF Names:	Dmel_CG8756 EMBL AAF49122.1

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	549 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	chitin metabolic process Inferred from electronic annotation. Source: InterPro regulation of tube length, open tracheal system Inferred from mutant phenotype. Source: FlyBase
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitin deacetylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9VW30-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 93C9B5B0BE255EE6	FASTA	549	62,510
	10 20 30 40 50 60 MARWWPILSV VCLCLAVDGL YVKNSFEPAI DQDPSRRYQR KPHGQDKLEG VDVEEVCADR 70 80 90 100 110 120 PADEYFRLET DGDCREVYRC TKSGLKEIQC PSGLAFDVIK QTCDWKAKVT NCDEKEKPRK 130 140 150 160 170 180 AKPILKTDEP ICPEGKLSCG DGECLDKELF CNGKSDCKDE SDENACSVDE DPNRAPECDP 190 200 210 220 230 240 TQCALPDCFC SADGTRIPGG IEPQQVPQMI TITFNGAVNV DNIDLYEDIF NGQRQNPNGC 250 260 270 280 290 300 SIKGTFFVSH KYTNYSAVQD LHRRGHEISV FSLTHKDDPN YWTGGSYDDW LAEMAGSRLI 310 320 330 340 350 360 VERFANITDG SIIGMRAPYL RVGGNKQFEM MADQFFVYDA SITASLGRVP IWPYTLYFRM 370 380 390 400 410 420 PHKCNGNAHN CPSRSHPVWE MVMNELDRRD DPTFDESLPG CHMVDSCSNV ASGDQFARLL 430 440 450 460 470 480 RHNFNRHYNS NRAPLGLHFH ASWLKSKKEY RDELIKFIEE MLGRNDVFFV TNLQVIQWMQ 490 500 510 520 530 540 NPTELNSLRD FQEWKEKCDV KGQPYCSLPN ACPLTTRELP GETLRLFTCM ECPNNYPWIL DPTGDGFSV

References

[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE014296 Genomic DNA. Translation: AAF49122.1.
RefSeq	NP_730443.1.
UniGene	Dm.11517
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9VW30. 2 interactions.
Protein family/group databases
CAZy	CBM14. Carbohydrate-Binding Module Family 14.
Proteomic databases
PRIDE	Q9VW30.
Genome annotation databases
Ensembl	FBgn0036901. Drosophila melanogaster. [Contig view]
GeneID	40149.
Organism-specific databases
FlyBase	FBgn0036901. LCBP1.
Gene expression databases
ArrayExpress	Q9VW30.
Family and domain databases
InterPro	IPR002557. Chitin-bd_peritrophin-A. IPR002172. LDL_rcpt_classA_cys-rich. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 1 hit.
Pfam	PF01607. CBM_14. 1 hit. PF00057. Ldl_recept_a. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SMART	SM00494. ChtBD2. 1 hit. SM00192. LDLa. 1 hit. [Graphical view]
PROSITE	PS50940. CHIT_BIND_II. 1 hit. PS01209. LDLRA_1. 1 hit. PS50068. LDLRA_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	817253.

Entry information

Entry name

Q9VW30_DROME

Accession

Primary (citable) accession number: Q9VW30

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)