Unreviewed, UniProtKB/TrEMBL Q9VUD5 (Q9VUD5_DROME)

Names and origin

Protein names

Submitted name:
    Nanchung EMBL AAF49752.2
Submitted name:
    TRP channel protein nanchung EMBL AAP57097.1

Gene names

Name:	nan EMBL AAF49752.2
ORF Names:	CG5842 FlyBase FBgn0036414, Dmel_CG5842 EMBL AAF49752.2

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	833 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Biological process	Ion transport Transport
Cellular component	Membrane
Domain	ANK repeat RuleBase RU003321V2 Spearmint SPM005821 Repeat RuleBase RU003536V1 Spearmint SPM005821 Transmembrane RuleBase RU003378V0
Molecular function	Ionic channel RuleBase RU003378V0
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ion transport Inferred from electronic annotation. Source: InterPro response to humidity Inferred from mutant phenotype. Source: FlyBase sensory perception of sound Ref.3 Inferred from mutant phenotype. Source: FlyBase
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	ion channel activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9VUD5-1 [UniParc]. Last modified July 5, 2004. Version 2. Checksum: DCE6BEC9D66ABB40	FASTA	833	96,196
	10 20 30 40 50 60 MGNTESNVTS GVKKQAGVST QALYKFVNLK GGGLLVDMMK RACQTKQFAE IDHAIKTKVE 70 80 90 100 110 120 PFLYNKGAGR YFPISKLVLL RNRDRPRTRQ LPEIRALENP DDDFNIHDYC PEVSEAEYIS 130 140 150 160 170 180 NPTAYRFVCW DLNMRGAVGE TILHLCLLNA SSLHADLAKR LLKFYPKLIL DIYMSDEYYG 190 200 210 220 230 240 ESVLHIAIVN EDPAMVKYLL DANADVQERC CGAFMSAEDT KFSRTDSPDH EYVALCPMTN 250 260 270 280 290 300 YDGYVYWGEY PLSFAACLSQ EECFRLVLAR GADPDFQDTN GNTVLHMLVI YEKIEMFDVG 310 320 330 340 350 360 YEVGTNIHIK NIQNLTPLTL AAKLGRVEMF FHVMSIEREI YWQLGSITCA AYPLLMIDTI 370 380 390 400 410 420 NEETGNINKD SVLNFVVFGD KLEHLELLDG VVIDLLKTKW DTFCKSRFYK QFYMFALYFL 430 440 450 460 470 480 ISLFSFILRP GPDAKDEDED GANSTTAKSD LYRQNGSDSY HLHSKRATMT TEYKTFWLNF 490 500 510 520 530 540 TEYYDPSEVE VLPAWWESYA QCPLMNLESD LAKLRIMAEL LNFVGAILYL LVALREARFL 550 560 570 580 590 600 GLKMFIENLM TAPSRVMFLF SCALMMTIPW LRVSCLTEID DHVTVVIMLT TAPYFLFFCR 610 620 630 640 650 660 GFKTVGPFVV MIYRMVMGDL LRFVSIYLVF VMGFSQAFYI IFLTFDNPSS PEDQDAESNP 670 680 690 700 710 720 MPSPMESIVA MFLMSLTNFG DYYGAMVSTQ HEYEAKILFF LFMVIVSVLL VNMLIAMMGN 730 740 750 760 770 780 TYQKIAEIRN EWQRQWARIV LVVERSVPPA ERLKNFMQYS QSMSDGRRAL VLRLNMTEEK 790 800 810 820 830 EEMKEVQEMK RIHQRFAKKR QMEREARALR RQQEYEKFFG TAPKSECSDN NNF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[3]	"A TRPV family ion channel required for hearing in Drosophila." Kim J., Chung Y.D., Park D.Y., Choi S., Shin D.W., Soh H., Lee H.W., Son W., Yim J., Park C.S., Kernan M.J., Kim C. Nature 424:81-84(2003) [PubMed: 12819662] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Canton-S EMBL AAP57097.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE014296 Genomic DNA. Translation: AAF49752.2. AY262004 mRNA. Translation: AAP57097.1.
RefSeq	NP_648696.2.
UniGene	Dm.15300
3D structure databases
ModBase	Search...
Protein family/group databases
TCDB	1.A.4.8.1. transient receptor potential Ca2+ channel (TRP-CC) family.
Genome annotation databases
Ensembl	FBgn0036414. Drosophila melanogaster. [Contig view]
GeneID	39571.
KEGG	dme:Dmel_CG5842.
NMPDR	fig|7227.3.peg.9794.
Organism-specific databases
FlyBase	FBgn0036414. nan.
Phylogenomic databases
HOGENOM	Q9VUD5.
OMA	Q9VUD5. ETGNINK.
Gene expression databases
ArrayExpress	Q9VUD5.
Family and domain databases
InterPro	IPR002110. ANK. IPR005821. Ion_trans. [Graphical view]
Gene3D	G3DSA:1.25.40.20. ANK. 1 hit.
Pfam	PF00023. Ank. 5 hits. PF00520. Ion_trans. 1 hit. [Graphical view]
SMART	SM00248. ANK. 5 hits. [Graphical view]
PROSITE	PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 2 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	814324.

Entry information

Entry name

Q9VUD5_DROME

Accession

Primary (citable) accession number: Q9VUD5
Secondary accession number(s): Q7Z077

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	July 5, 2004
Last modified:	June 16, 2009
This is version 69 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)