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Q9VU88 (Q9VU88_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
AT31531p EMBL AAQ23626.1
Submitted name:
CG10743, isoform A EMBL AAF49801.1
Submitted name:
CG10743, isoform B EMBL AAN11829.1
Gene names
Name:Liprin-beta FlyBase FBgn0036376
ORF Names:CG10743 FlyBase FBgn0036376 EMBL AAQ23626.1, Dmel_CG10743 EMBL AAF49801.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length680 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processaxon target recognition

Inferred from mutant phenotype. Source: FlyBase

synaptic growth at neuromuscular junction

Inferred from mutant phenotype. Source: FlyBase

   Cellular componentprotein complex

Inferred from direct assay. Source: FlyBase

   Molecular functionprotein homodimerization activity

Inferred from physical interaction. Source: FlyBase

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VU88 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 707793A1D7ACDB62

FASTA68075,648
        10         20         30         40         50         60 
MATVAEGSKM LEAALQQMDG LISSTATQAG SVSISGAGSS LTLSERNLIS ATNVLSTAKT 

        70         80         90        100        110        120 
LALALQQVGL AAPAPDPVTA AIISDWLETH IPRQDSDERM RRLQRDKEGL ALQYQMLAER 

       130        140        150        160        170        180 
VSEQADKIIE LEGLITEKSQ QLCTKEEQLQ RQMISSSALE TQKLELMSAL SELKLHRTAL 

       190        200        210        220        230        240 
EQANDGGSAI SANIPYGSLS NINQKAFMGS PKTPPSALRH QIKPQFHSLP RSHGKFVNNN 

       250        260        270        280        290        300 
NNRALDVNAN SSGKQRNVAF ASNEHILIDD NHHQAEDAMT SSFMSQFTPS PKLRERSARG 

       310        320        330        340        350        360 
LRNILGKLRR SNSSNCELTA LEQAEPEFRR GGARATAGGR IEWSAQTPLF GENEKHWTTW 

       370        380        390        400        410        420 
GAQEVCNWLA YMGLGCYEDN CRKWLNANPS VSFFTASPVD IERELNLKMP LHRKKILLAI 

       430        440        450        460        470        480 
DDLTGKEFDD LTLKASSLDV TWVLRWLDDI GLPQYKDYFM QAKIDGRMLH RLTLEDLSQL 

       490        500        510        520        530        540 
HVSSCLHIAS LRAGILCMRR LSWNAEGLIR RSIKVVSEDE AAATPDRDNV ELWTAHRIMG 

       550        560        570        580        590        600 
WLQTIDLSEY TPNLRGAGVH GALMLYEPRF NADLLADLLS IPPSKSLLRR HLAMHFKELV 

       610        620        630        640        650        660 
GRPVILSKRD AESAPGYQPL SITAKLKPVK RTQFSLKRRK SSKSQSDVDW TEYVCPMNAS 

       670        680 
VPETYLADTA KEHESSMSSN

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014296 Genomic DNA. Translation: AAF49801.1.
AE014296 Genomic DNA. Translation: AAN11829.1.
BT010308 mRNA. Translation: AAQ23626.1.
RefSeqNP_648661.1. NM_140404.1.
NP_729920.1. NM_168556.1.
UniGeneDm.15315.

3D structure databases

ProteinModelPortalQ9VU88.
SMRQ9VU88. Positions 363-499.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VU88. 1 interaction.
MINTMINT-342729.
STRINGQ9VU88.

Proteomic databases

PRIDEQ9VU88.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0075813; FBpp0075555; FBgn0036376.
FBtr0075814; FBpp0075556; FBgn0036376.
GeneID39524.
KEGGdme:Dmel_CG10743.
UCSCCG10743-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0036376. Liprin-beta.

Phylogenomic databases

eggNOGinNOG04238.
GeneTreeEMGT00050000000853.
InParanoidQ9VU88.
OMAWLETHIP.
OrthoDBEOG4F7M12.
PhylomeDBQ9VU88.

Gene expression databases

ArrayExpressQ9VU88.
BgeeQ9VU88.

Family and domain databases

InterProIPR001660. SAM.
IPR013761. SAM/pointed.
IPR011510. SAM_2.
IPR021129. SAM_type1.
[Graphical view]
Gene3DG3DSA:1.10.150.50. SAM_type. 2 hits.
PfamPF00536. SAM_1. 2 hits.
PF07647. SAM_2. 1 hit.
[Graphical view]
SMARTSM00454. SAM. 3 hits.
[Graphical view]
SUPFAMSSF47769. SAM_homology. 2 hits.
PROSITEPS50105. SAM_DOMAIN. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio814101.

Entry information

Entry nameQ9VU88_DROME
AccessionPrimary (citable) accession number: Q9VU88
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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