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Reviewed, UniProtKB/Swiss-Prot Q9VRX6 (INX4_DROME)

Last modified June 16, 2009. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Innexin inx4
      Short name=Innexin-4
Alternative name(s):
    Protein zero population growth
Gene names
Name: zpg
Synonyms: inx4
ORF Names: CG10125
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

Structural component of the gap junctions in germline cells. Required for differentiation and survival of germline cysts in females and of spermatogonia in males; gap junctional communication between spermatogonia and somatic cyst cells may be required for normal differentiation and survival of spermatogonia. Ref.1 Ref.2

Subcellular location

Cell membrane; Multi-pass membrane protein. Cell junctiongap junction. Note: Concentrated at the interface between germline and somatic support cells in spermatogonia, early spermatocytes and germ cells in the ovary. Ref.2

Tissue specificity

Expressed in nurse cells and oocyte during oogenesis. Uniform expression in imaginal wing disk and low expression in developing imaginal CNS. Expressed in embryonic pole cells and primordial germ cells. Ref.1 Ref.2

Developmental stage

Expressed both maternally and zygotically. First seen at the embryonic syncitial blastoderm stage. Ref.2

Sequence similarities

Belongs to the pannexin family.

Ontologies

Keywords
   Cellular componentCell junction
Cell membrane
Gap junction
Membrane
   DomainTransmembrane
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processgerm cell development Ref.2

Inferred from mutant phenotype. Source: FlyBase

   Cellular componentgap junction Ref.2

Inferred from direct assay. Source: UniProtKB

integral to membrane Ref.2

Non-traceable author statement. Source: UniProtKB

   Molecular functiongap junction channel activity

Non-traceable author statement. Source: FlyBase

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 367367Innexin inx4
PRO_0000208499

Regions

Topological domain1 – 2121Cytoplasmic Potential
Transmembrane22 – 4221 Potential
Topological domain43 – 11068Extracellular Potential
Transmembrane111 – 13121 Potential
Topological domain132 – 18655Cytoplasmic Potential
Transmembrane187 – 20721 Potential
Topological domain208 – 26861Extracellular Potential
Transmembrane269 – 28921 Potential
Topological domain290 – 36778Cytoplasmic Potential

Sequences

Sequence LengthMass (Da)Tools
Q9VRX6-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: B984A4035DA7CF3E

FASTA36742,784
        10         20         30         40         50         60 
MYAAVKPLSK YLQFKSVHIY DAIFTLHSKV TVALLLACTF LLSSKQYFGD PIQCFGDKDM 

        70         80         90        100        110        120 
DYVHAFCWIY GAYVSDNVTV TPLRNGAAQC RPDAVSKVVP PENRNYITYY QWVVLVLLLE 

       130        140        150        160        170        180 
SFVFYMPAFL WKIWEGGRLK HLCDDFHKMA VCKDKSRTHL RVLVNYFSSD YKETHFRYFV 

       190        200        210        220        230        240 
SYVFCEILNL SISILNFLLL DVFFGGFWGR YRNALLSLYN GDYNQWNIIT MAVFPKCAKC 

       250        260        270        280        290        300 
EMYKGGPSGS SNIYDYLCLL PLNILNEKIF AFLWIWFILV AMLISLKFLY RLATVLYPGM 

       310        320        330        340        350        360 
RLQLLRARAR FMPKKHLQVA LRNCSFGDWF VLMRVGNNIS PELFRKLLEE LYEAQSLIKI 


PPGADKI 

« Hide

References

« Hide 'large scale' references
[1]"Gap junctions in Drosophila: developmental expression of the entire innexin gene family."
Stebbings L.A., Todman M.G., Phillips R., Greer C.E., Tam J., Phelan P., Jacobs K., Bacon J.P., Davies J.A.
Mech. Dev. 113:197-205(2002) [PubMed: 11960713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE, FUNCTION, TISSUE SPECIFICITY.
Tissue: Ovary.
[2]"A germline-specific gap junction protein required for survival of differentiating early germ cells."
Tazuke S.I., Schulz C., Gilboa L., Fogarty M., Mahowald A.P., Guichet A., Ephrussi A., Wood C.G., Lehmann R., Fuller M.T.
Development 129:2529-2539(2002) [PubMed: 11973283] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE, FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
Tissue: Ovary.
[3]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[4]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: GENOME REANNOTATION.
[5]"A Drosophila full-length cDNA resource."
Stapleton M., Carlson J.W., Brokstein P., Yu C., Champe M., George R.A., Guarin H., Kronmiller B., Pacleb J.M., Park S., Wan K.H., Rubin G.M., Celniker S.E.
Genome Biol. 3:RESEARCH0080.1-RESEARCH0080.8(2002) [PubMed: 12537569] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Berkeley.
Tissue: Embryo.
+Additional computationally mapped references.

Cross-references

Sequence databases

AF271718 mRNA. Translation: AAL36976.1.
AE014296 Genomic DNA. Translation: AAF50655.1.
AY094856 mRNA. Translation: AAM11209.1.
RefSeqNP_648049.1.
UniGeneDm.3496

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:17426N.
IntActQ9VRX6. 1 interaction.

Proteomic databases

PRIDEQ9VRX6.

Genome annotation databases

EnsemblFBgn0024177. Drosophila melanogaster. [Contig view]
GeneID251414.
KEGGdme:Dmel_CG10125.
NMPDRfig|7227.3.peg.8556.

Organism-specific databases

FlyBaseFBgn0024177. zpg.

Phylogenomic databases

HOGENOMQ9VRX6.
OMAQ9VRX6. WITFNSA.

Enzyme and pathway databases

BioCycDMEL-XXX-02:DMEL-XXX-02-015465-MON.

Gene expression databases

ArrayExpressQ9VRX6.
GermOnlineCG10125. Drosophila melanogaster.

Family and domain databases

InterProIPR000990. Innexin.
[Graphical view]
PANTHERPTHR11893. Innexin. 1 hit.
PfamPF00876. Innexin. 1 hit.
[Graphical view]
PRINTSPR01262. INNEXIN.
PROSITEPS51013. PANNEXIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio843533.

Entry information

Entry nameINX4_DROME
AccessionPrimary (citable) accession number: Q9VRX6
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectDrosophila annotation project

Relevant documents

Drosophila

Drosophila: entries, gene names and cross-references to FlyBase

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents