Unreviewed, UniProtKB/TrEMBL Q9VR90 (Q9VR90_DROME)

Names and origin

Protein names

Submitted name:
    Syntaxin 16 EMBL AAF50914.1

Gene names

Name:	Syx16 EMBL AAF50914.1
ORF Names:	Dmel_CG1467 EMBL AAF50914.1

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	352 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the syntaxin family. RuleBase RU003858V0 Contains 1 t-SNARE coiled-coil homology domain. Spearmint SPM000727

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	intracellular protein transport Inferred from electronic annotation. Source: InterPro neurotransmitter secretion Non-traceable author statement. Source: FlyBase vesicle-mediated transport Inferred from electronic annotation. Source: InterPro
Cellular component	Golgi membrane Inferred by curator. Source: FlyBase integral to membrane Inferred from direct assay. Source: FlyBase plasma membrane Non-traceable author statement. Source: FlyBase
Molecular function	SNAP receptor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q9VHB5	1	EBI-173419,EBI-169701
	Q9VX47	1	EBI-173419,EBI-138705
Ama	P15364	1	EBI-173419,EBI-195387
CG7856	Q9V9K1	1	EBI-173419,EBI-85713
Snap	Q23983	1	EBI-173419,EBI-195132

Sequences

	Sequence		Length	Mass (Da)
	Q9VR90-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: B28E70EEF09FA570	FASTA	352	40,399
	10 20 30 40 50 60 MTSRNLTEVF VIMRNNASKN RNHYDDRRGS DAERLLKHSV REAEEGLELQ DDYGTPPAWL 70 80 90 100 110 120 DKFEEAQYTM SKIKPKLDEL GSLHARHLLR PAFDDQRDDE CDIEVLSQIV SKLITSTHRH 130 140 150 160 170 180 IQCVRSSIGV GSKMEQCLTV NAVHCALLQL QELTVKFRAS QNAYLLQLNS REERSQKYFD 190 200 210 220 230 240 DGGGAGAGDV FTNVELGEQS AENFVDSFDN FLQPPAEGKS GNGYLFEDDE QAIDDHFQRP 250 260 270 280 290 300 PASRMTQQQL LLFEEENTRV AQHREQEVTK IVKSIYDLND IFKDLGHMVQ EQGTVLDRID 310 320 330 340 350 YNVEQTQTRV SEGLRQLHKA EMYQRKNRKM CVILVLAAVT FFMLLLLILT KL

References

[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE014298 Genomic DNA. Translation: AAF50914.1.
RefSeq	NP_523420.1.
UniGene	Dm.232
3D structure databases
HSSP	HSSP built from PDB template 1JTH based on UniProtKB P32851.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9VR90. 27 interactions.
Proteomic databases
PRIDE	Q9VR90.
Genome annotation databases
Ensembl	FBgn0031106. Drosophila melanogaster. [Contig view]
GeneID	33034.
KEGG	dme:Dmel_CG1467.
NMPDR	fig|7227.3.peg.18777.
Organism-specific databases
FlyBase	FBgn0031106. Syx16.
Phylogenomic databases
OMA	Q9VR90. NVEQSCV.
Gene expression databases
ArrayExpress	Q9VR90.
Family and domain databases
InterPro	IPR006012. Syntaxin/epimorphin_CS. IPR006011. Syntaxin_N. IPR000727. T_SNARE. [Graphical view]
Pfam	PF05739. SNARE. 1 hit. PF00804. Syntaxin. 1 hit. [Graphical view]
SMART	SM00397. t_SNARE. 1 hit. [Graphical view]
PROSITE	PS00914. SYNTAXIN. 1 hit. PS50192. T_SNARE. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	781618.

Entry information

Entry name

Q9VR90_DROME

Accession

Primary (citable) accession number: Q9VR90

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)