Unreviewed,
UniProtKB/TrEMBL Q9VR90 (Q9VR90_DROME)
Last modified
June 16, 2009.
Version 56.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Syntaxin 16 EMBL AAF50914.1 | ||||
| Gene names |
| ||||
| Organism | Drosophila melanogaster (Fruit fly) [Complete proteome] | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 352 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Sequence similarities | Belongs to the syntaxin family. RuleBase RU003858V0 Contains 1 t-SNARE coiled-coil homology domain. Spearmint SPM000727 |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | intracellular protein transport Inferred from electronic annotation. Source: InterPro neurotransmitter secretionNon-traceable author statement. Source: FlyBase vesicle-mediated transportInferred from electronic annotation. Source: InterPro |
| Cellular component | Golgi membrane Inferred by curator. Source: FlyBase integral to membraneInferred from direct assay. Source: FlyBase plasma membraneNon-traceable author statement. Source: FlyBase |
| Molecular function | SNAP receptor activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| Q9VHB5 | 1 | EBI-173419,EBI-169701 | ||
| Q9VX47 | 1 | EBI-173419,EBI-138705 | ||
| Ama | P15364 | 1 | EBI-173419,EBI-195387 | |
| CG7856 | Q9V9K1 | 1 | EBI-173419,EBI-85713 | |
| Snap | Q23983 | 1 | EBI-173419,EBI-195132 |
Sequences
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References
| [1] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| [2] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AE014298 Genomic DNA. Translation: AAF50914.1. | |
| RefSeq | NP_523420.1. |
| UniGene | Dm.232 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1JTH based on UniProtKB P32851. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9VR90. 27 interactions. |
Proteomic databases | |
| PRIDE | Q9VR90. |
Genome annotation databases | |
| Ensembl | FBgn0031106. Drosophila melanogaster. [Contig view] |
| GeneID | 33034. |
| KEGG | dme:Dmel_CG1467. |
| NMPDR | fig|7227.3.peg.18777. |
Organism-specific databases | |
| FlyBase | FBgn0031106. Syx16. |
Phylogenomic databases | |
| OMA | Q9VR90. NVEQSCV. |
Gene expression databases | |
| ArrayExpress | Q9VR90. |
Family and domain databases | |
| InterPro | IPR006012. Syntaxin/epimorphin_CS. IPR006011. Syntaxin_N. IPR000727. T_SNARE. [Graphical view] |
| Pfam | PF05739. SNARE. 1 hit. PF00804. Syntaxin. 1 hit. [Graphical view] |
| SMART | SM00397. t_SNARE. 1 hit. [Graphical view] |
| PROSITE | PS00914. SYNTAXIN. 1 hit. PS50192. T_SNARE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 781618. |
Entry information
| Entry name | Q9VR90_DROME | ||||||||
| Accession | Primary (citable) accession number: Q9VR90 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with


