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Protein
Submitted name:

Chitin deacetylase-like 4

Gene

Cda4

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • carbohydrate metabolic process Source: InterPro
  • chitin catabolic process Source: GO_Central
  • neurogenesis Source: FlyBase
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.

Names & Taxonomyi

Protein namesi
Submitted name:
Chitin deacetylase-like 4Imported (EC:3.5.-.-Imported)
Submitted name:
RE51076pImported
Gene namesi
Name:Cda4Imported
ORF Names:CG32499Imported, Dmel_CG32499Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome X

Organism-specific databases

FlyBaseiFBgn0052499. Cda4.

Subcellular locationi

GO - Cellular componenti

  • perivitelline space Source: FlyBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 486468Sequence analysisPRO_5007718581Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi7227.FBpp0077054.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 8258Chitin-binding type-2InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IM07. Eukaryota.
ENOG410Y6KQ. LUCA.
GeneTreeiENSGT00530000064558.
OMAiMDQCVLH.
OrthoDBiEOG7JHM4H.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
3.20.20.370. 1 hit.
InterProiIPR002557. Chitin-bd_dom.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. NODB_dom.
[Graphical view]
PfamiPF01607. CBM_14. 1 hit.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
[Graphical view]
SUPFAMiSSF57625. SSF57625. 1 hit.
SSF88713. SSF88713. 1 hit.
PROSITEiPS50940. CHIT_BIND_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9VR69-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRQCLVGVL LVITGANGQG KEKEEFQCPS HIANGNYADP ATCRRFYQCV
60 70 80 90 100
DGYPYLNRCP SGLFFDDVQK FCTFKDEAKC GPLPTTPAPA TEAPADTAQR
110 120 130 140 150
CNTENCALPY CFCSKDGTQI PGDLEPEKIP QIIMLTFDGA VNLNNYQHYQ
160 170 180 190 200
KIFDGKRKNP NGCLIRGTFF MSHEYSNYQQ IQHLGYYGHE IGTESISQQQ
210 220 230 240 250
GLQDKGYEEW VGEMIGMREI LRHFANVSVN DVVGMRAPFL KPGRNTQYKV
260 270 280 290 300
LEDFGYIYDS SITVPPVPVP VWPYTLDYKI SHECKSGTCP SRTFPGVWEV
310 320 330 340 350
PLNTHYVEGY EGGHCPYLDQ CVLHNLDEEE VFQWLQEDFS RYYEQNKAPY
360 370 380 390 400
MMPFHTNWFQ TKPLENGLHK FLDWALELPD VYILTVTQML QYVTDPKELR
410 420 430 440 450
DVSQIESWKC DKSVSVAPKP CNIWQTCALP FKIPEQNLTD TRYMETCREC
460 470 480
PNVYPWLGDA GGTGIAGRDN YIFAGGENPE EEDSAK
Length:486
Mass (Da):55,417
Last modified:October 1, 2002 - v2
Checksum:iB7722D286E1A1AAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF50937.2.
AY113493 mRNA. Translation: AAM29498.1.
RefSeqiNP_728468.1. NM_167788.2.
UniGeneiDm.13386.

Genome annotation databases

EnsemblMetazoaiFBtr0077362; FBpp0077054; FBgn0052499.
GeneIDi33144.
KEGGidme:Dmel_CG32499.
UCSCiCG32499-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF50937.2.
AY113493 mRNA. Translation: AAM29498.1.
RefSeqiNP_728468.1. NM_167788.2.
UniGeneiDm.13386.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7227.FBpp0077054.

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0077362; FBpp0077054; FBgn0052499.
GeneIDi33144.
KEGGidme:Dmel_CG32499.
UCSCiCG32499-RA. d. melanogaster.

Organism-specific databases

CTDi33144.
FlyBaseiFBgn0052499. Cda4.

Phylogenomic databases

eggNOGiENOG410IM07. Eukaryota.
ENOG410Y6KQ. LUCA.
GeneTreeiENSGT00530000064558.
OMAiMDQCVLH.
OrthoDBiEOG7JHM4H.

Miscellaneous databases

ChiTaRSiCda4. fly.
GenomeRNAii33144.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
3.20.20.370. 1 hit.
InterProiIPR002557. Chitin-bd_dom.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. NODB_dom.
[Graphical view]
PfamiPF01607. CBM_14. 1 hit.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
[Graphical view]
SUPFAMiSSF57625. SSF57625. 1 hit.
SSF88713. SSF88713. 1 hit.
PROSITEiPS50940. CHIT_BIND_II. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  3. Cited for: GENOME REANNOTATION.
    Strain: BerkeleyImported.
  4. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
    Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
    Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  5. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
    Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
    Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  6. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BerkeleyImported.
  7. "Combined evidence annotation of transposable elements in genome sequences."
    Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
    PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  8. "Drosophila melanogaster release 4 sequence."
    Berkeley Drosophila Genome Project
    Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
    Smith C.D., Shu S., Mungall C.J., Karpen G.H.
    Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  12. Millard Andrew
    Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9VR69_DROME
AccessioniPrimary (citable) accession number: Q9VR69
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: July 6, 2016
This is version 120 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.