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Q9VQK5 (Q9VQK5_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
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Names and origin

Protein namesSubmitted name:
CG3542, isoform A EMBL AAF51160.1
Submitted name:
LD24714p EMBL AAL13780.1
Gene names
ORF Names:CG3542 FlyBase FBgn0031492 EMBL AAL13780.1, Dmel_CG3542 EMBL AAF51160.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length806 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processnuclear mRNA splicing, via spliceosome

Inferred by curator. Source: FlyBase

   Cellular componentprecatalytic spliceosome

Inferred from direct assay. Source: FlyBase

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VQK5 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 181CA24F0D8720AD

FASTA80691,328
        10         20         30         40         50         60 
MNVPPSVGNG GAPPGRGIGY TPPGAIVPQF PPPGFGAPPP PELAAAFGVM ATSTEWTEHK 

        70         80         90        100        110        120 
APDGRPYYYN QNTKQSSWEK PEALMTPAEL LHNQCPWKEY RSDTGKVYYH NVATKETCWE 

       130        140        150        160        170        180 
PPPEYVDMKA KAKAEEAAAA AKAVAAMTSS SLAGMVPPAA LASILPAALP VAPRLPTPEI 

       190        200        210        220        230        240 
HSPLTPSSNE NSSSAMDQAM AATLAAIEVP QQNAKKDDKS ESAVVFKDKR EAIESFKELL 

       250        260        270        280        290        300 
RDRNVPSNAN WDQCVKIISK DPRYAAFKNL NERKQTFNAY KTQKIKDERE ESRLKAKKAK 

       310        320        330        340        350        360 
EDLEQFLMSS DKMNSQMKYF RCEEVFAGTR TWTAVPEPDR RDIYEDCIFN LAKREKEEAR 

       370        380        390        400        410        420 
LLKKRNMKVL GELLESMTSI NHATTWSEAQ VMLLDNVAFK NDVTLLGMDK EDALIVFEEH 

       430        440        450        460        470        480 
IRTLEKEEDE EREREKKRMK RQQRKNRDSF LALLDSLHEE GKLTSMSLWV ELYPIISADL 

       490        500        510        520        530        540 
RFSAMLGQSG STPLDLFKFY VENLKARFHD EKKIIREILK EKAFVVQAKT SFEDFATVVC 

       550        560        570        580        590        600 
EDKRSASLDA GNVKLTYNSL LEKAEAIEKE RMKEEVRRLR KLENEIKNEW LEANVSVAEP 

       610        620        630        640        650        660 
YESAKKLVEH LEAFALYEKE IGVEKIWEDF VKESEDACSH HHSRSRKSKK NKKHKKRVRS 

       670        680        690        700        710        720 
VSRSDIENEH IEVEKSKRRR SKTRSHSLTS IGSIESEKLL KKKKKRKNKL RGSSCESDVP 

       730        740        750        760        770        780 
GIQSPGTQAL LQNDSNSHSP AKKKKKEKRA KKDKRHNRHN RSGTPLSPAQ SVESSGSRNE 

       790        800 
ELTLSDGELE SKRAALLAQL SEQLDE

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL13780.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014134 Genomic DNA. Translation: AAF51160.1.
AY058551 mRNA. Translation: AAL13780.1.
RefSeqNP_608738.1. NM_134894.3.
UniGeneDm.4165.

3D structure databases

HSSPHSSP built from PDB template 1E0L based on UniProtKB Q61051.
ProteinModelPortalQ9VQK5.
SMRQ9VQK5. Positions 51-130, 220-286, 288-361.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VQK5. 2 interactions.
STRINGQ9VQK5.

Proteomic databases

PRIDEQ9VQK5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0077648; FBpp0077333; FBgn0031492.
GeneID33513.
KEGGdme:Dmel_CG3542.
UCSCCG3542-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0031492. CG3542.

Phylogenomic databases

GeneTreeEMGT00070000025739.
InParanoidQ9VQK5.
OMAQETVADF.
PhylomeDBQ9VQK5.

Gene expression databases

ArrayExpressQ9VQK5.
BgeeQ9VQK5.

Family and domain databases

InterProIPR002713. FF_domain.
IPR001202. WW_Rsp5_WWP.
[Graphical view]
Gene3DG3DSA:1.10.10.440. FF. 3 hits.
G3DSA:2.20.70.10. G3DSA:2.20.70.10. 2 hits.
KOK12821.
PfamPF01846. FF. 2 hits.
PF00397. WW. 2 hits.
[Graphical view]
SMARTSM00441. FF. 3 hits.
SM00456. WW. 2 hits.
[Graphical view]
SUPFAMSSF81698. FF. 2 hits.
SSF51045. WW_Rsp5_WWP. 2 hits.
PROSITEPS01159. WW_DOMAIN_1. 2 hits.
PS50020. WW_DOMAIN_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio783971.

Entry information

Entry nameQ9VQK5_DROME
AccessionPrimary (citable) accession number: Q9VQK5
Secondary accession number(s): Q9VQK6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info