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Q9VPF3 (Q9VPF3_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
4-hydroxyphenylpyruvate dioxygenase PIRNR PIRNR009283
Gene names
ORF Names:CG11796 FlyBase FBgn0036992 EMBL AAS77442.1, Dmel_CG11796 EMBL AAF51601.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Binds 1 iron ion per subunit By similarity. PIRSR PIRSR009283-1

Sequence similarities

Belongs to the 4HPPD family. PIRNR PIRNR009283 PIRSR PIRSR009283-1

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1821Iron By similarity PIRSR PIRSR009283-1
Metal binding2651Iron By similarity PIRSR PIRSR009283-1
Metal binding3481Iron By similarity PIRSR PIRSR009283-1

Sequences

Sequence LengthMass (Da)Tools
Q9VPF3 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6BC6026F3C7DBDFA

FASTA38043,297
        10         20         30         40         50         60 
MTSYTDKGTK PEAGKFLSFD HLTFYVGNAK QAASYYTTRL GFEPLGYQGL ETGERRFAKH 

        70         80         90        100        110        120 
AVRQNKIVFV FVSAYTPDDE EHGLHLMRHG DGVKDVAFEV EDLNAIFTLA VSRGAEVVRD 

       130        140        150        160        170        180 
IWEESDDQGF VRFATIKTYG DTTHTFVERN GYAGDFLPGF QRSPKDVLLN GLPSTKLNFI 

       190        200        210        220        230        240 
DHVVGNQPDL QMESVASWYE RILQFHRFWS VDDSQIHTEY SALRSIVMAN YEETVKMPIN 

       250        260        270        280        290        300 
EPANGKKKSQ IQEYVEYYGG GGVQHIALNT DDIIEAVSNL KARGTEFLTI PSSYYEILQE 

       310        320        330        340        350        360 
QLSHSRTKIK EDMEVLKKLN ILIDFDENGY LLQIFTKNCQ DRPTLFLEVI QRYNHNGFGA 

       370        380 
GNFKSLFTAI EIEQAKRGNL

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Rubin G.M., Celniker S.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAS77442.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014296 Genomic DNA. Translation: AAF51601.1.
BT012317 mRNA. Translation: AAS77442.1.
RefSeqNP_730536.1. NM_168857.2.
UniGeneDm.4664.

3D structure databases

HSSPHSSP built from PDB template 1CJX based on UniProtKB P80064.
ProteinModelPortalQ9VPF3.
SMRQ9VPF3. Positions 10-380.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VPF3. 2 interactions.
STRINGQ9VPF3.

Proteomic databases

PRIDEQ9VPF3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0078225; FBpp0077883; FBgn0036992.
GeneID40263.
KEGGdme:Dmel_CG11796.
UCSCCG11796-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0036992. CG11796.

Phylogenomic databases

GeneTreeEMGT00050000016473.
InParanoidQ9VPF3.
OMAHIAMNTS.
PhylomeDBQ9VPF3.

Gene expression databases

ArrayExpressQ9VPF3.
BgeeQ9VPF3.

Family and domain databases

InterProIPR005956. 4OHPhenylPyrv_dOase.
IPR004360. Glyas_Fos-R_dOase.
[Graphical view]
KOK00457.
PANTHERPTHR11959. HPP_dOase. 1 hit.
PfamPF00903. Glyoxalase. 2 hits.
[Graphical view]
PIRSFPIRSF009283. HPP_dOase. 1 hit.
TIGRFAMsTIGR01263. 4HPPD. 1 hit.
ProtoNetSearch...

Other

NextBio817857.

Entry information

Entry nameQ9VPF3_DROME
AccessionPrimary (citable) accession number: Q9VPF3
Secondary accession number(s): Q9VPF4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info