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Q9VPD2 (NUBP2_DROME) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Cytosolic Fe-S cluster assembly factor NUBP2 homolog
Gene names
ORF Names:CG4858
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length260 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for maturation of extramitochondrial Fe/S proteins. May bind and transfer a labile 4Fe-4S cluster to target apoproteins By similarity.

Sequence similarities

Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.

Binary interactions

With

Entry

#Exp.

IntAct

Notes

CG14104Q9VW421EBI-168094,EBI-141111
CG17904Q9VJI91EBI-168094,EBI-115857

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 260260Cytosolic Fe-S cluster assembly factor NUBP2 homolog
PRO_0000382711

Regions

Nucleotide binding14 – 218ATP Potential

Sites

Metal binding1691Iron-sulfur (4Fe-4S) Potential
Metal binding1881Iron-sulfur (4Fe-4S) Potential
Metal binding1911Iron-sulfur (4Fe-4S) Potential
Metal binding1941Iron-sulfur (4Fe-4S) Potential

Sequences

Sequence LengthMass (Da)Tools
Q9VPD2 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 2830181B9B60D4DC

FASTA26028,250
        10         20         30         40         50         60 
MLDKVKNVIV VLSGKGGVGK STVSTQLSLA LRKNGFKVGL LDIDLCGPSV PYLLGLEGRD 

        70         80         90        100        110        120 
IFQCDDGWVP VYTDESQTLA VMSIGFLLKN REDPVIWRGP KKTMMIRQFL TDVRWDELDY 

       130        140        150        160        170        180 
LIIDTPPGTS DEHITVMECL KEVGCHGAII VTTPQEVALD DVRKEITFCK KTGINILGIV 

       190        200        210        220        230        240 
ENMSGFVCPH CTSCTNIFSS NGGVSLATYA QVPHLGTLPI DPRVGILAGT TTSVLDELPD 

       250        260 
STTAEVLTHI VEKLKTMLVS 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
[3]Stapleton M., Carlson J.W., Chavez C., Frise E., George R.A., Pacleb J.M., Park S., Wan K.H., Yu C., Rubin G.M., Celniker S.E.
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Berkeley.
Tissue: Larva and Pupae.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014296 Genomic DNA. Translation: AAF51623.1.
BT012307 mRNA. Translation: AAS77432.1.
RefSeqNP_649243.1. NM_140986.2.

3D structure databases

ProteinModelPortalQ9VPD2.
SMRQ9VPD2. Positions 1-239.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VPD2. 4 interactions.
MINTMINT-294350.
STRINGQ9VPD2.

Proteomic databases

PRIDEQ9VPD2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0078210; FBpp0077868; FBgn0037011.
GeneID40282.
KEGGdme:Dmel_CG4858.
NMPDRfig|7227.3.peg.10782.
UCSCCG4858-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0037011. CG4858.

Phylogenomic databases

eggNOGinNOG07715.
GeneTreeEMGT00050000005675.
InParanoidQ9VPD2.
OMAGPKKTMM.
OrthoDBEOG4SBCDT.
PhylomeDBQ9VPD2.

Gene expression databases

ArrayExpressQ9VPD2.
BgeeQ9VPD2.

Family and domain databases

InterProIPR019591. ATPase-like_ParA/MinD.
IPR000808. Mrp_CS.
[Graphical view]
PfamPF10609. ParA. 1 hit.
[Graphical view]
PROSITEPS01215. MRP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio817965.

Entry information

Entry nameNUBP2_DROME
AccessionPrimary (citable) accession number: Q9VPD2
Entry history
Integrated into UniProtKB/Swiss-Prot: September 1, 2009
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Relevant documents

Drosophila

Drosophila: entries, gene names and cross-references to FlyBase

SIMILARITY comments

Index of protein domains and families