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Q9VMS4

- Q9VMS4_DROME

UniProt

Q9VMS4 - Q9VMS4_DROME

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Protein
Submitted name: GH23983p
Gene
vri, CG14029, Dmel_CG14029
Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription Source: FlyBase
  2. protein heterodimerization activity Source: FlyBase
  3. protein homodimerization activity Source: FlyBase
  4. sequence-specific DNA binding Source: InterPro

GO - Biological processi

  1. cellular process Source: FlyBase
  2. chaeta morphogenesis Source: FlyBase
  3. circadian rhythm Source: FlyBase
  4. imaginal disc-derived wing hair organization Source: FlyBase
  5. locomotor rhythm Source: FlyBase
  6. multicellular organismal aging Source: FlyBase
  7. multicellular organismal development Source: FlyBase
  8. negative regulation of transcription from RNA polymerase II promoter Source: GOC
  9. open tracheal system development Source: FlyBase
  10. positive regulation of heart contraction Source: FlyBase
  11. rhythmic behavior Source: FlyBase
  12. transcription, DNA-templated Source: FlyBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
GH23983pImported
Submitted name:
Vrille, isoform AImported
Submitted name:
Vrille, isoform DImported
Submitted name:
Vrille, isoform FImported
Gene namesi
Name:vriImported
ORF Names:CG14029Imported, Dmel_CG14029Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000000803: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0016076. vri.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: FlyBase
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000064087.
InParanoidiQ9VMS4.
KOiK12114.
OMAiHIKQEPN.

Family and domain databases

InterProiIPR004827. bZIP.
[Graphical view]
PfamiPF07716. bZIP_2. 1 hit.
[Graphical view]
SMARTiSM00338. BRLZ. 1 hit.
[Graphical view]
PROSITEiPS50217. BZIP. 1 hit.
PS00036. BZIP_BASIC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9VMS4-1 [UniParc]FASTAAdd to Basket

« Hide

MSIVCTLEQK VNFFKAAATT KNLLILKNNT DTNYINNYKQ DNPSNNKFPR    50
IQAQSNNSHL QHQQQLQQKL AQLHHYSQQK LSGSDFPYGP RPPTGGKEEK 100
LLLLAPPGKL YPEASVSTAM PEVLSGTPTN SHNKANIAMM NNVRLSNISP 150
TLSMNGSSNE ASNLHPLSMY GGSISPQSND SGMSDSLGKY VPGSGYGDGM 200
MAQSPSQGGN GPQSALTAAQ KELFSQRKQR EFTPDNKKDE SYWDRRRRNN 250
EAAKRSREKR RYNDMVLEQR VIELTKENHV LKAQLDAIRD KFNISGENLV 300
SVEKILASLP TSEQVLSNTK RAKMSGSGGS SSGSSPSGSG SGEGSPQGGH 350
NGYPVGPPLS PLIYGPNGNA RPEATVKSVH HIHHAGVAPP PTHLQQLVVP 400
QSQTQHLYQP QPQQHQPHQQ QQISQPPQQQ QQQQEPSPSA GSSSPVISDP 450
HNRPPSTTIA NLQVQLQQAL NRNVRPEDLD SLRKVVAAGA LYNAAAVVGA 500
PPPPPSAGLY VPAPSAYKDH LEAAAAWSHN VEAAVSSSAV DAVSSSSVSG 550
SAASVLNLSR RACSPSYEHM LSSTTSSTLS SASSSGAVSG DDEQEHEPAH 600
MAPLQLQRSS PQQGSDANNC LPLKLRHKSH LGDKDAAATA LLSLQHIKQE 650
PNCSRASPPA WNDGGDNSSD ERDSGISIAS AEWTAQLQRK LLAPKEANVV 700
TSAERDQMLK SQLERLESEV ASIKMILAE 729
Length:729
Mass (Da):78,296
Last modified:May 1, 2000 - v1
Checksum:i02B206B630220B5E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014134 Genomic DNA. Translation: AAF52237.1.
BT031200 mRNA. Translation: ABY20441.1.
AE014134 Genomic DNA. Translation: ACL82998.1.
AE014134 Genomic DNA. Translation: AHN54139.1.
RefSeqiNP_001137792.1. NM_001144320.1.
NP_477191.1. NM_057843.3.
UniGeneiDm.3340.

Genome annotation databases

EnsemblMetazoaiFBtr0079071; FBpp0078706; FBgn0016076.
FBtr0300020; FBpp0289297; FBgn0016076.
GeneIDi33759.
KEGGidme:Dmel_CG14029.
UCSCiCG14029-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014134 Genomic DNA. Translation: AAF52237.1 .
BT031200 mRNA. Translation: ABY20441.1 .
AE014134 Genomic DNA. Translation: ACL82998.1 .
AE014134 Genomic DNA. Translation: AHN54139.1 .
RefSeqi NP_001137792.1. NM_001144320.1.
NP_477191.1. NM_057843.3.
UniGenei Dm.3340.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai FBtr0079071 ; FBpp0078706 ; FBgn0016076 .
FBtr0300020 ; FBpp0289297 ; FBgn0016076 .
GeneIDi 33759.
KEGGi dme:Dmel_CG14029.
UCSCi CG14029-RA. d. melanogaster.

Organism-specific databases

CTDi 33759.
FlyBasei FBgn0016076. vri.

Phylogenomic databases

GeneTreei ENSGT00530000064087.
InParanoidi Q9VMS4.
KOi K12114.
OMAi HIKQEPN.

Miscellaneous databases

GenomeRNAii 33759.
NextBioi 785117.

Family and domain databases

InterProi IPR004827. bZIP.
[Graphical view ]
Pfami PF07716. bZIP_2. 1 hit.
[Graphical view ]
SMARTi SM00338. BRLZ. 1 hit.
[Graphical view ]
PROSITEi PS50217. BZIP. 1 hit.
PS00036. BZIP_BASIC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  3. Cited for: GENOME REANNOTATION.
    Strain: Berkeley.
  4. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
    Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
    Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  5. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
    Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
    Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  6. "Combined evidence annotation of transposable elements in genome sequences."
    Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
    PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  7. Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  8. "Drosophila melanogaster release 4 sequence."
    Berkeley Drosophila Genome Project
    Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
    Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
    Smith C.D., Shu S., Mungall C.J., Karpen G.H.
    Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  10. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  11. Stapleton M., Carlson J., Frise E., Kapadia B., Park S., Wan K., Yu C., Celniker S.
    Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BerkeleyImported.
  12. FlyBase
    Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9VMS4_DROME
AccessioniPrimary (citable) accession number: Q9VMS4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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