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Q9VMR4

- Q9VMR4_DROME

UniProt

Q9VMR4 - Q9VMR4_DROME

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Protein
Submitted name:

Mechanosensory transduction channel NOMPC

Gene

nompC

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ankyrin binding Source: FlyBase
  2. calcium channel activity Source: FlyBase
  3. cytoskeletal protein binding Source: FlyBase
  4. ion channel activity Source: FlyBase
  5. mechanically-gated ion channel activity Source: FlyBase

GO - Biological processi

  1. calcium ion transmembrane transport Source: GOC
  2. calcium ion transport Source: FlyBase
  3. detection of mechanical stimulus involved in sensory perception Source: FlyBase
  4. ion transmembrane transport Source: GOC
  5. locomotion Source: FlyBase
  6. mechanosensory behavior Source: FlyBase
  7. response to auditory stimulus Source: FlyBase
  8. sensory perception of mechanical stimulus Source: FlyBase
  9. sensory perception of sound Source: FlyBase
  10. sensory perception of touch Source: FlyBase
  11. startle response Source: FlyBase
Complete GO annotation...

Keywords - Molecular functioni

Ion channelUniRule annotation, ReceptorImported

Keywords - Biological processi

Ion transport, Transport

Protein family/group databases

TCDBi1.A.4.7.2. the transient receptor potential ca(2+) channel (trp-cc) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Mechanosensory transduction channel NOMPCImported
Submitted name:
No mechanoreceptor potential C, isoform AImported
Gene namesi
Name:nompCImported
ORF Names:CG11020Imported, Dmel_CG11020Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000000803: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0016920. nompC.

Subcellular locationi

GO - Cellular componenti

  1. cilium Source: FlyBase
  2. dendrite Source: FlyBase
  3. integral component of membrane Source: UniProtKB-KW
  4. neuronal cell body Source: FlyBase
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Contains 29 ANK repeats.UniRule annotation

Keywords - Domaini

ANK repeatUniRule annotationSAAS annotation, RepeatUniRule annotation, TransmembraneUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000118950.

Family and domain databases

Gene3Di1.25.40.20. 5 hits.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR005821. Ion_trans_dom.
[Graphical view]
PfamiPF00023. Ank. 2 hits.
PF12796. Ank_2. 8 hits.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR01415. ANKYRIN.
SMARTiSM00248. ANK. 29 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 4 hits.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 20 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9VMR4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQPRGGRGG GRGGGVGRKT PSSLTGPPDE SATPSERATP ASKADSDPKD
60 70 80 90 100
DSSSNGDKKD MDLFPAPKPP SAGASIRDTA NKVLGLAMKS EWTPIEAELK
110 120 130 140 150
KLEKYVANVG EDGNHIPLAG VHDMNTGMTP LMYATKDNKT AIMDRMIELG
160 170 180 190 200
ADVGARNNDN YNVLHIAAMY SREDVVKLLL TKRGVDPFST GGSRSQTAVH
210 220 230 240 250
LVSSRQTGTA TNILRALLAA AGKDIRLKAD GRGKIPLLLA VESGNQSMCR
260 270 280 290 300
ELLAAQTAEQ LKATTANGDT ALHLAARRRD VDMVRILVDY GTNVDTQNGE
310 320 330 340 350
GQTPLHIAAA EGDEALLKYF YGVRASASIA DNQDRTPMHL AAENGHAHVI
360 370 380 390 400
EILADKFKAS IFERTKDGST LMHIASLNGH AECATMLFKK GVYLHMPNKD
410 420 430 440 450
GARSIHTAAA YGHTGIINTL LQKGEKVDVT TNDNYTALHI AVESAKPAVV
460 470 480 490 500
ETLLGFGADV HVRGGKLRET PLHIAARVKD GDRCALMLLK SGASPNLTTD
510 520 530 540 550
DCLTPVHVAA RHGNLATLMQ LLEDEGDPLY KSNTGETPLH MACRACHPDI
560 570 580 590 600
VRHLIETVKE KHGPDKATTY INSVNEDGAT ALHYTCQITK EEVKIPESDK
610 620 630 640 650
QIVRMLLENG ADVTLQTKTA LETAFHYCAV AGNNDVLMEM ISHMNPTDIQ
660 670 680 690 700
KAMNRQSSVG WTPLLIACHR GHMELVNNLL ANHARVDVFD TEGRSALHLA
710 720 730 740 750
AERGYLHVCD ALLTNKAFIN SKSRVGRTAL HLAAMNGFTH LVKFLIKDHN
760 770 780 790 800
AVIDILTLRK QTPLHLAAAS GQMEVCQLLL ELGANIDATD DLGQKPIHVA
810 820 830 840 850
AQNNYSEVAK LFLQQHPSLV NATSKDGNTC AHIAAMQGSV KVIEELMKFD
860 870 880 890 900
RSGVISARNK LTDATPLQLA AEGGHADVVK ALVRAGASCT EENKAGFTAV
910 920 930 940 950
HLAAQNGHGQ VLDVLKSTNS LRINSKKLGL TPLHVAAYYG QADTVRELLT
960 970 980 990 1000
SVPATVKSET PTGQSLFGDL GTESGMTPLH LAAFSGNENV VRLLLNSAGV
1010 1020 1030 1040 1050
QVDAATIENG YNPLHLACFG GHMSVVGLLL SRSAELLQSQ DRNGRTGLHI
1060 1070 1080 1090 1100
AAMHGHIQMV EILLGQGAEI NATDRNGWTP LHCAAKAGHL EVVKLLCEAG
1110 1120 1130 1140 1150
ASPKSETNYG CAAIWFAASE GHNEVLRYLM NKEHDTYGLM EDKRFVYNLM
1160 1170 1180 1190 1200
VVSKNHNNKP IQEFVLVSPA PVDTAAKLSN IYIVLSTKEK ERAKDLVAAG
1210 1220 1230 1240 1250
KQCEAMATEL LALAAGSDSA GKILQATDKR NVEFLDVLIE NEQKEVIAHT
1260 1270 1280 1290 1300
VVQRYLQELW HGSLTWASWK ILLLLVAFIV CPPVWIGFTF PMGHKFNKVP
1310 1320 1330 1340 1350
IIKFMSYLTS HIYLMIHLSI VGITPIYPVL RLSLVPYWYE VGLLIWLSGL
1360 1370 1380 1390 1400
LLFELTNPSD KSGLGSIKVL VLLLGMAGVG VHVSAFLFVS KEYWPTLVYC
1410 1420 1430 1440 1450
RNQCFALAFL LACVQILDFL SFHHLFGPWA IIIGDLLKDL ARFLAVLAIF
1460 1470 1480 1490 1500
VFGFSMHIVA LNQSFANFSP EDLRSFEKKN RNRGYFSDVR MHPINSFELL
1510 1520 1530 1540 1550
FFAVFGQTTT EQTQVDKIKN VATPTQPYWV EYLFKIVFGI YMLVSVVVLI
1560 1570 1580 1590 1600
NLLIAMMSDT YQRIQVVLLN ALLSNSTLFI NSYFNHKYIN FILHCVLIIL
1610
YFSIRSKFTY EDDLYFLDI
Length:1,619
Mass (Da):176,844
Last modified:October 1, 2002 - v3
Checksum:iB4FE239ABB1D1138
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014134 Genomic DNA. Translation: AAF52248.3.
AF242296 mRNA. Translation: AAF59842.1.
RefSeqiNP_523483.1. NM_078759.3.
UniGeneiDm.3306.

Genome annotation databases

EnsemblMetazoaiFBtr0079074; FBpp0078709; FBgn0016920.
GeneIDi33768.
KEGGidme:Dmel_CG11020.
UCSCiCG11020-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014134 Genomic DNA. Translation: AAF52248.3 .
AF242296 mRNA. Translation: AAF59842.1 .
RefSeqi NP_523483.1. NM_078759.3.
UniGenei Dm.3306.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein family/group databases

TCDBi 1.A.4.7.2. the transient receptor potential ca(2+) channel (trp-cc) family.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai FBtr0079074 ; FBpp0078709 ; FBgn0016920 .
GeneIDi 33768.
KEGGi dme:Dmel_CG11020.
UCSCi CG11020-RA. d. melanogaster.

Organism-specific databases

CTDi 33768.
FlyBasei FBgn0016920. nompC.

Phylogenomic databases

GeneTreei ENSGT00760000118950.

Miscellaneous databases

GenomeRNAii 33768.
NextBioi 785156.

Family and domain databases

Gene3Di 1.25.40.20. 5 hits.
InterProi IPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR005821. Ion_trans_dom.
[Graphical view ]
Pfami PF00023. Ank. 2 hits.
PF12796. Ank_2. 8 hits.
PF00520. Ion_trans. 1 hit.
[Graphical view ]
PRINTSi PR01415. ANKYRIN.
SMARTi SM00248. ANK. 29 hits.
[Graphical view ]
SUPFAMi SSF48403. SSF48403. 4 hits.
PROSITEi PS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 20 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  2. "A Drosophila mechanosensory transduction channel."
    Walker R.G., Willingham A.T., Zuker C.S.
    Science 0:0-0(2000)
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  4. Cited for: GENOME REANNOTATION.
    Strain: BerkeleyImported.
  5. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
    Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
    Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  6. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
    Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
    Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  7. "Combined evidence annotation of transposable elements in genome sequences."
    Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
    PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  8. Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. "Drosophila melanogaster release 4 sequence."
    Berkeley Drosophila Genome Project
    Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
    Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
    Smith C.D., Shu S., Mungall C.J., Karpen G.H.
    Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  12. FlyBase
    Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9VMR4_DROME
AccessioniPrimary (citable) accession number: Q9VMR4
Secondary accession number(s): Q9NGR8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: October 29, 2014
This is version 131 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3