Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9VM62 (Q9VM62_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
LD34181p EMBL AAL28958.1
Submitted name:
Stromalin EMBL AAF52463.2
Gene names
Name:SA EMBL AAL28958.1
ORF Names:Dmel_CG3423 EMBL AAF52463.2
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length1127 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9VM62 [UniParc].

Last modified July 5, 2004. Version 2.
Checksum: 8DCC0C6934228712

FASTA1,127130,116
        10         20         30         40         50         60 
MMARRGGKRI RMDDPPPDYE ELHSDALNES TSDADSPTKR MTRLRARGGV RDKPPIIDDD 

        70         80         90        100        110        120 
EDDFFAPIAR KRKTPATRKG PTERKERVER PRKEPVDKGH HERIDSEREI TTDENSLYYI 

       130        140        150        160        170        180 
VRHSKNPIAS IVDQWIEQYK ANRETALVAL MQFFINASGC KGKISEDIQY PVDHTSIIRR 

       190        200        210        220        230        240 
MTEEFDEESG EYPLIMSGTQ WRKFKNNFCD FVQTLVKQCQ YSIIYDQFLM DNVISLLTGL 

       250        260        270        280        290        300 
SDSQVRAFRH TATLAAMKLM TALVDVALLV SNNFDNAAKQ FEAERVKSRD RRASDRLDSL 

       310        320        330        340        350        360 
MTKRSELEEN MDEIKSMLTY MFKSVFVHRY RDSLPDIRAI CMAEIGIWME NYPQNFLDDS 

       370        380        390        400        410        420 
YLKYIGWTLH DKIGEVRLRC LQSLLPLYEK DELKGKLELF TSKFKDRIVA MTLDKEFEVS 

       430        440        450        460        470        480 
VHAVKLVISI LKIHPEILAD KDCEIVYELV YSSHRGVAQA AAEFLNVRLF HLTADMEETK 

       490        500        510        520        530        540 
TKRGKVRMPN TPLVRDLVQF FIESELHEHG AYLVDSFIDS NDMVRDWECM TDLLLEEPGP 

       550        560        570        580        590        600 
NEEVLDNKQE STLIEIMVSS VKQSATGEVP VGRASNRKCT LSAKELKAIQ DEKAKLTEHF 

       610        620        630        640        650        660 
IVTLPSLLEK YQADSEKLAN LLAVPQYFDL NLYTTNRQEG NLQALLDRIN QVMSMHTGRE 

       670        680        690        700        710        720 
VLETCAKTLE CLCAEGSATY TRCNIARSNI IESAVNKYKD AIEEWRNLIQ GEETPNEDDI 

       730        740        750        760        770        780 
YNITITLKVL SILYSSHNLN PWELFKSLFQ DVEEAQSKEN IDRCLPNEAL VYCIEACYFS 

       790        800        810        820        830        840 
ISWGLQYVEN ECESVNVTEV VAELRNNLDT FMGACFELTR DGPTVQIQEA AYQSICDLLI 

       850        860        870        880        890        900 
IFSDKLARSE IEHIRGLEYK SRMDEHLILD NFVQHYVFSL KQDVAQDETR IEELHKKRNF 

       910        920        930        940        950        960 
LACYCKLVVY NIIPTMRAAS IFKYYVKCYN DYGDIIKATL GKAREINKVN FAMTLLLSLI 

       970        980        990       1000       1010       1020 
TVFKSLQEQS EDGIVSKSSQ EFVDLKELAK RFALTFGFDA IKNRESVAAI HRGGIYFAAN 

      1030       1040       1050       1060       1070       1080 
KEPDDPVRAP TRLLFLEVLN EFNYKLLKQD KKVIMSFLDK IIPPAMPSSR AEEWQPLILY 

      1090       1100       1110       1120 
RNSLLHGETD QAPVASKRAY TRKRRDHDEE EEEEEDEEEH NDPDYRG

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL28958.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014134 Genomic DNA. Translation: AAF52463.2.
AY061410 mRNA. Translation: AAL28958.1.
RefSeqNP_477268.2. NM_057920.3.
UniGeneDm.336.

3D structure databases

ProteinModelPortalQ9VM62.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VM62. 2 interactions.
STRINGQ9VM62.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0079349; FBpp0078977; FBgn0020616.
GeneID33974.
KEGGdme:Dmel_CG3423.
NMPDRfig|7227.3.peg.1161.
UCSCCG3423-RA. d. melanogaster.

Organism-specific databases

CTD33974.
FlyBaseFBgn0020616. SA.

Phylogenomic databases

GeneTreeEMGT00050000013087.
InParanoidQ9VM62.
OMAHERIDSE.
PhylomeDBQ9VM62.

Gene expression databases

ArrayExpressQ9VM62.
BgeeQ9VM62.

Family and domain databases

InterProIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR020839. SCD.
IPR013721. STAG.
[Graphical view]
Gene3DG3DSA:1.25.10.10. ARM-like. 4 hits.
KOK06671.
PfamPF08514. STAG. 1 hit.
[Graphical view]
SUPFAMSSF48371. ARM-type_fold. 1 hit.
PROSITEPS51425. SCD. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio786218.

Entry information

Entry nameQ9VM62_DROME
AccessionPrimary (citable) accession number: Q9VM62
Secondary accession number(s): Q95RF8
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: July 5, 2004
Last modified: January 25, 2012
This is version 79 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info