Q9VM55 (Q9VM55_DROME) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 98.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: SP1070, isoform A EMBL AAF52472.2 | ||||||
| Gene names |
| ||||||
| Organism | Drosophila melanogaster (Fruit fly) | ||||||
| Taxonomic identifier | 7227 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 3561 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Contains 2 F5/8 type C domains. RuleBase RU003308 |
Ontologies
| Keywords | |
|---|---|
| Domain | EGF-like domain RuleBase RU000458 SAAS SAAS016060 Repeat SAAS SAAS000436 |
| PTM | Disulfide bond SAAS SAAS016060 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | cell adhesion Inferred from electronic annotation. Source: InterPro regulation of tube architecture, open tracheal systemInferred from mutant phenotype. Source: FlyBase |
| Cellular component | apical plasma membrane Inferred from direct assay. Source: FlyBase |
| Molecular function | calcium ion binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley. |
| [2] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE014134 Genomic DNA. Translation: AAF52472.2. |
| RefSeq | NP_609091.3. NM_135247.4. |
| UniGene | Dm.3294. |
3D structure databases | |
| ProteinModelPortal | Q9VM55. |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | Q9VM55. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblMetazoa | FBtr0079354; FBpp0078982; FBgn0031879. |
| GeneID | 33983. |
| KEGG | dme:Dmel_CG9138. |
| NMPDR | fig|7227.3.peg.1174. |
| UCSC | CG9138-RA. d. melanogaster. |
Organism-specific databases | |
| CTD | 33983. |
| FlyBase | FBgn0031879. uif. |
Phylogenomic databases | |
| GeneTree | EMGT00050000000205. |
| InParanoid | Q9VM55. |
| PhylomeDB | Q9VM55. |
Gene expression databases | |
| ArrayExpress | Q9VM55. |
| Bgee | Q9VM55. |
Family and domain databases | |
| InterPro | IPR001304. C-type_lectin. IPR016186. C-type_lectin-like. IPR016187. C-type_lectin_fold. IPR000421. Coagulation_fac_5/8-C_type_dom. IPR016060. Complement_control_module. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR000859. CUB. IPR006209. EGF. IPR006210. EGF-like. IPR001881. EGF-like_Ca-bd. IPR013032. EGF-like_reg_CS. IPR000152. EGF-type_Asp/Asn_hydroxyl_site. IPR000742. EGF_3. IPR018097. EGF_Ca-bd_CS. IPR008979. Galactose-bd-like. IPR009030. Growth_fac_rcpt. IPR003410. Hyalin. IPR023415. LDLR_class-A_CS. IPR002172. LDrepeatLR_classA_rpt. IPR000436. Sushi_SCR_CCP. IPR001368. TNFR_Cys_rich_reg. IPR011641. Tyr-kin_ephrin_A/B_rcpt-like. [Graphical view] |
| Gene3D | G3DSA:3.10.100.10. C-type_lectin-like. 1 hit. G3DSA:2.10.70.10. Complement_control_module. 7 hits. G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.60.120.290. CUB. 3 hits. G3DSA:4.10.400.10. LDL_rcpt_classA_cys-rich. 1 hit. |
| Pfam | PF00431. CUB. 3 hits. PF00008. EGF. 10 hits. PF07645. EGF_CA. 2 hits. PF00754. F5_F8_type_C. 2 hits. PF07699. GCC2_GCC3. 7 hits. PF02494. HYR. 3 hits. PF00084. Sushi. 4 hits. [Graphical view] |
| SMART | SM00032. CCP. 8 hits. SM00034. CLECT. 1 hit. SM00042. CUB. 3 hits. SM00181. EGF. 10 hits. SM00179. EGF_CA. 9 hits. SM00231. FA58C. 2 hits. SM00192. LDLa. 1 hit. SM00208. TNFR. 3 hits. [Graphical view] |
| SUPFAM | SSF56436. C-type_lectin_fold. 1 hit. SSF57535. Complement_control_module. 7 hits. SSF49899. ConA_like_lec_gl. 1 hit. SSF49854. CUB. 3 hits. SSF49785. Gal_bind_like. 2 hits. SSF57184. Grow_fac_recept. 3 hits. SSF57424. LDL_rcpt_classA_cys-rich. 1 hit. |
| PROSITE | PS00010. ASX_HYDROXYL. 11 hits. PS50041. C_TYPE_LECTIN_2. 1 hit. PS01180. CUB. 3 hits. PS00022. EGF_1. 15 hits. PS01186. EGF_2. 13 hits. PS50026. EGF_3. 17 hits. PS01187. EGF_CA. 7 hits. PS01285. FA58C_1. 1 hit. PS50022. FA58C_3. 2 hits. PS50825. HYR. 3 hits. PS01209. LDLRA_1. 1 hit. PS50068. LDLRA_2. 1 hit. PS50923. SUSHI. 8 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 786266. |
Entry information
| Entry name | Q9VM55_DROME | ||||||||
| Accession | Primary (citable) accession number: Q9VM55 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with