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Q9VL02 (Q9VL02_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 95. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
GH08677p EMBL AAM50147.1
Submitted name:
No mitochondrial derivative EMBL AAF52903.1
EC=3.6.1.3 EMBL AAF52903.1
Gene names
Name:nmd FlyBase FBgn0005322
ORF Names:CG5395 FlyBase FBgn0005322 EMBL AAM50147.1, Dmel_CG5395 EMBL AAF52903.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length369 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the AAA ATPase family. RuleBase RU003651

Sequences

Sequence LengthMass (Da)Tools
Q9VL02 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 07206595D8DAB308

FASTA36941,563
        10         20         30         40         50         60 
MDNFGLGGSD LSKGQIFQVL VRLSVASLIT YYSVKWMMNQ MDPTSKNKKK AKVLAEEQLK 

        70         80         90        100        110        120 
RLAEQEGFKL RGQEFSDYEL MIASHLVVPA DITVSWADIA GLDSVIQELR ESVVLPIQHK 

       130        140        150        160        170        180 
DLFKHSKLWQ APKGVLLHGP PGCGKTLIAK ATAKEAGMRF INLDVAILTD KWYGESQKLT 

       190        200        210        220        230        240 
SAVFSLASRI EPCIIFIDEI DSFLRSRNMN DHEATAMMKT QFMMLWDGLS TNANSTVIVM 

       250        260        270        280        290        300 
GATNRPQDLD KAIVRRMPAQ FHIGLPSETQ RKDILKLILQ SEEVSQDVDL NRLSKLTNGF 

       310        320        330        340        350        360 
SGSDLREMCR NASVYRMRQL ITSRDPSATA LDRNNVRITM DDLLGSHLKI KESKMHTSSL 


FLENRIELD

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References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAM50147.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014134 Genomic DNA. Translation: AAF52903.1.
AY119493 mRNA. Translation: AAM50147.1.
RefSeqNP_609373.1. NM_135529.2.
UniGeneDm.11450.

3D structure databases

HSSPHSSP built from PDB template 1R7R based on UniProtKB Q01853.
ProteinModelPortalQ9VL02.
SMRQ9VL02. Positions 83-355.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VL02. 3 interactions.
MINTMINT-282656.
STRINGQ9VL02.

Proteomic databases

PRIDEQ9VL02.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0080065; FBpp0079654; FBgn0005322.
GeneID44021.
KEGGdme:Dmel_CG5395.
UCSCCG5395-RA. d. melanogaster.

Organism-specific databases

CTD44021.
FlyBaseFBgn0005322. nmd.

Phylogenomic databases

eggNOGinNOG05793.
GeneTreeEMGT00050000004565.
InParanoidQ9VL02.
OMAEMCRNAS.
OrthoDBEOG4PG4GP.
PhylomeDBQ9VL02.

Gene expression databases

ArrayExpressQ9VL02.
BgeeQ9VL02.

Family and domain databases

InterProIPR003593. ATPase_AAA+_core.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
[Graphical view]
PfamPF00004. AAA. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
PROSITEPS00674. AAA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio836621.

Entry information

Entry nameQ9VL02_DROME
AccessionPrimary (citable) accession number: Q9VL02
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info