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Q9VKV1 (Q9VKV1_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
BcDNA.GH02419 EMBL AAD38576.1
Submitted name:
CG6206, isoform A EMBL AAF52958.2
EC=3.2.1.24 EMBL AAF52958.2
Gene names
Name:BcDNA.GH02419 EMBL AAD38576.1
ORF Names:CG6206 FlyBase FBgn0027611, Dmel_CG6206 EMBL AAF52958.2
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length1080 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9VKV1 [UniParc].

Last modified October 1, 2002. Version 2.
Checksum: 8674FA11D40B11F5

FASTA1,080122,685
        10         20         30         40         50         60 
MSAKTSVWLV FFCALGCLIH DADLRSIQPK ASQCGYQSCH PTKPNMLNVH LVAHTHDDVG 

        70         80         90        100        110        120 
WLKTVDQYYY GSETKIQKAG VQYIIDSVVE ALLRDPEKRF IYVESAFFFK WWKEQKPKVQ 

       130        140        150        160        170        180 
EAVKMLVEQG RLEFIGGAWS MNDEATTHYQ SVIDQFSWGL RLLNDTFGEC GRPRVGWQID 

       190        200        210        220        230        240 
PFGHSREMAS MFAQMGFDGM FFGRLDYQDK DERLMTKNAE MIWHGSANLG EEADLFSGAL 

       250        260        270        280        290        300 
YNNYQAPDGF CFDILCNDAP IIDGKHSPDN NVKERIDTFL DFAKTQSQYY RTNNIIVTMG 

       310        320        330        340        350        360 
GDFTYQAAQV YYKNLDKLIR YGNERQANGS NINLLYSTPS CYLKSLHDAG ITWPTKSDDF 

       370        380        390        400        410        420 
FPYASDPHAY WTGYFTSRPT LKRFERDGNH FLQVCKQLSA LAPKKPEEFD PHLTFMRETL 

       430        440        450        460        470        480 
GIMQHHDAIT GTEKEKVALD YAKRMSVAFR ACGATTRNAL NQLTVQSKDN VKDTSAKYVF 

       490        500        510        520        530        540 
EFKTCALLNI TSCPVSEAND RFALTLYNPL AHTVNEYVRI PVPYSNYRII DNKGVTLESQ 

       550        560        570        580        590        600 
AVPIPQVLID IKHRNSTAKY EIVFLATNIP ALGYRTYYVE KLDSTEGNTR SKALPKRTSS 

       610        620        630        640        650        660 
VTVIGNSHIQ LGFDTNGFLS EVTADGLTRL VSQEFLFYEG AVGNNAEFLN RSSGAYIFRP 

       670        680        690        700        710        720 
NENKIHFATD QVEIEVYKGD LVHEVHQKFN DWISQVVRVY NKDSYAEFEW LVGPIPIDDG 

       730        740        750        760        770        780 
IGKEVITRFN SDIASDGIFR TDSNGREMIK RKINHRDTWS VKINEAVAGN YYPITTKIDV 

       790        800        810        820        830        840 
EDDTARMAIL TDRAQGGSSL KDGSLELMVH RRLLKDDAFG VGEALNETEY GDGLIARGKH 

       850        860        870        880        890        900 
HLFFGKSTDR EGVSLKGIER LTQLEKLLPT WKFFSNMEDY SADEWQTAFT NIFSGISLVL 

       910        920        930        940        950        960 
PKPVHLLTLE PWHENQLLVR FEHIMENGED ASYSQPVQFN VKNVLSAFDV EGIRETTLDG 

       970        980        990       1000       1010       1020 
NAWLDESRRL QFAPDPEEAA FNTYATFSQP AESVHLLSAE KPMLGVKYAD EALPAGQLGA 

      1030       1040       1050       1060       1070       1080 
ESNRIRRETE TRQEKKDEGR SSKSTEGPYN SFKSDSSNQE YIIELSPMEI RTFIVYLTPA

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]"Full length Drosophila melanogaster cDNA sequence."
Rubin G.M., Wan K.H., Harvey D., Lewis S.E., Brokstein P., Tsang G., Agbayani A., Arcaina T.T., Baxter E., Blazej R.G., Butenhoff C., Champe M., Chavez C., Chew M., Doyle C.M., Farfan D.E., Frise E., Galle R. expand/collapse author list , George R.A., Harris N.L., Hoskins R.A., Evans-Holm M., Houston K.A., Hummasti S.R., Kim E., Li P., Moshrefi M., Pacleb J.M., Park S., Sequeira A., Sethi H., Snir E., Svirskas R.R., Weinburg T., Celniker S.E.
Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF145601 mRNA. Translation: AAD38576.1.
AE014134 Genomic DNA. Translation: AAF52958.2.
RefSeqNP_609408.1. NM_135564.3.
UniGeneDm.7758.

3D structure databases

HSSPHSSP built from PDB template 1O7D based on UniProtKB Q29451.
ProteinModelPortalQ9VKV1.
SMRQ9VKV1. Positions 35-324, 332-402, 600-876, 890-975.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VKV1. 2 interactions.
MINTMINT-1014247.

Protein family/group databases

CAZyGH38. Glycoside Hydrolase Family 38.

Proteomic databases

PRIDEQ9VKV1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0080030; FBpp0079620; FBgn0027611.
GeneID34437.
KEGGdme:Dmel_CG6206.
NMPDRfig|7227.3.peg.1844.
UCSCCG6206-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0027611. CG6206.

Phylogenomic databases

GeneTreeEMGT00050000002240.
InParanoidQ9VKV1.
OMASPVVQDD.
PhylomeDBQ9VKV1.

Gene expression databases

ArrayExpressQ9VKV1.
BgeeQ9VKV1.

Family and domain databases

InterProIPR011013. Glyco_hydro-type_carb-bd.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR013780. Glyco_hydro_13_b.
IPR011682. Glyco_hydro_38_C.
IPR015341. Glyco_hydro_38_cen_dom.
IPR000602. Glyco_hydro_38_core.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KOK12311.
PfamPF09261. Alpha-mann_mid. 1 hit.
PF01074. Glyco_hydro_38. 1 hit.
PF07748. Glyco_hydro_38C. 1 hit.
[Graphical view]
SMARTSM00872. Alpha-mann_mid. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNetSearch...

Other

NextBio788493.

Entry information

Entry nameQ9VKV1_DROME
AccessionPrimary (citable) accession number: Q9VKV1
Secondary accession number(s): Q9Y167
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: January 25, 2012
This is version 88 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info