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Q9VJD4 (Q9VJD4_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
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Names and origin

Protein namesSubmitted name:
LD24721p EMBL AAM11154.1
Submitted name:
MIP20650p EMBL ADF27166.1
Submitted name:
Small glutamine-rich tetratricopeptide containing protein EMBL AAF53617.1
Gene names
Name:Sgt FlyBase FBgn0032640
ORF Names:CG5094 FlyBase FBgn0032640 EMBL AAM11154.1, Dmel_CG5094 EMBL AAF53617.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length331 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9VJD4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6D3E51A473A962F7

FASTA33136,253
        10         20         30         40         50         60 
MPDAVQQSFV RSFIDYLKKQ GDVMSPDQTE SIEVAIQCLQ AAFDLGDDVE AAPAAAGEEQ 

        70         80         90        100        110        120 
ATTQSSSTAS APDDDAVASG SAGIGAAAAA VPNNIDMFEL FQSLYTERNP ESLALAESIK 

       130        140        150        160        170        180 
NEGNRLMKEN KYNEALLQYN RAIAFDPKNP IFYCNRAAAH IRLGENERAV TDCKSALVYN 

       190        200        210        220        230        240 
NNYSKAYCRL GVAYSNMGNF EKAEQAYAKA IELEPDNEVY KSNLEAARNA RNQPPQTGRL 

       250        260        270        280        290        300 
REDLINMLSQ PMVRNLFNNA EIDVEQLLSM LQNPMIMNTI RQQFGGGNAP TLPNDMVQMI 

       310        320        330 
YNMTSQLTGF PNSNANPGNE QQPGNQPPPS T

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Carlson J., Booth B., Frise E., Sandler J., Wan K., Yu C., Celniker S.
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAM11154.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014134 Genomic DNA. Translation: AAF53617.1.
AY094801 mRNA. Translation: AAM11154.1.
BT124738 mRNA. Translation: ADF27166.1.
RefSeqNP_609842.1. NM_135998.1.
UniGeneDm.7266.

3D structure databases

ProteinModelPortalQ9VJD4.
SMRQ9VJD4. Positions 111-235.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VJD4. 10 interactions.
MINTMINT-328618.
STRINGQ9VJD4.

Proteomic databases

PRIDEQ9VJD4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0080982; FBpp0080535; FBgn0032640.
FBtr0305683; FBpp0296963; FBgn0032640.
GeneID35052.
KEGGdme:Dmel_CG5094.
NMPDRfig|7227.3.peg.2753.
UCSCCG5094-RA. d. melanogaster.

Organism-specific databases

CTD35052.
FlyBaseFBgn0032640. Sgt.

Phylogenomic databases

eggNOGinNOG10283.
GeneTreeEMGT00050000004687.
InParanoidQ9VJD4.
OMAIDMFELF.
OrthoDBEOG4BK3KP.
PhylomeDBQ9VJD4.

Gene expression databases

ArrayExpressQ9VJD4.
BgeeQ9VJD4.

Family and domain databases

InterProIPR023114. Elongated_TPR_rpt_dom.
IPR001440. TPR-1.
IPR013026. TPR-contain.
IPR011990. TPR-like_helical.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.10.150.160. Elongated_TPR_rpt_dom. 1 hit.
G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
PfamPF00515. TPR_1. 1 hit.
[Graphical view]
SMARTSM00028. TPR. 3 hits.
[Graphical view]
PROSITEPS50005. TPR. 3 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio791577.

Entry information

Entry nameQ9VJD4_DROME
AccessionPrimary (citable) accession number: Q9VJD4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info