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Protein

39S ribosomal protein L13, mitochondrial

Gene

mRpL13

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: GO_Central
  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • mitochondrial translation Source: FlyBase
  • translation Source: FlyBase

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-5389840. Mitochondrial translation elongation.
R-DME-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L13, mitochondrial
Short name:
L13mt
Short name:
MRP-L13
Gene namesi
Name:mRpL13
ORF Names:CG10603
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0032720. mRpL13.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001337951 – 17839S ribosomal protein L13, mitochondrialAdd BLAST178

Proteomic databases

PaxDbiQ9VJ38.
PRIDEiQ9VJ38.

Expressioni

Gene expression databases

BgeeiFBgn0032720.
ExpressionAtlasiQ9VJ38. differential.
GenevisibleiQ9VJ38. DM.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins (By similarity).By similarity

Protein-protein interaction databases

IntActiQ9VJ38. 41 interactors.
STRINGi7227.FBpp0088360.

Structurei

3D structure databases

ProteinModelPortaliQ9VJ38.
SMRiQ9VJ38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3203. Eukaryota.
COG0102. LUCA.
GeneTreeiENSGT00390000001515.
InParanoidiQ9VJ38.
KOiK02871.
OMAiVLMGKHK.
OrthoDBiEOG091G0QCX.
PhylomeDBiQ9VJ38.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9VJ38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIAKRVQQW ATFARTWHIY DCTWQNPFES AKLVKTHLLG LQKPIYHPMN
60 70 80 90 100
DCGDHVVLIN TREIALPGDE WVKRVYFHHT GYPGGASWTL AWQLHEKDPT
110 120 130 140 150
MVMKKAVYNS MRGNLQRRHT MQRLHLFADD QVPEEILQNV TNQIRTPRSI
160 170
PQRLDHIDKE TLENFPNIMD YPKDYILR
Length:178
Mass (Da):21,090
Last modified:October 1, 2002 - v2
Checksum:i4F2E4FA6D12360C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014134 Genomic DNA. Translation: AAF53719.2.
BT053702 mRNA. Translation: ACK77619.1.
RefSeqiNP_523598.2. NM_078874.4.
UniGeneiDm.2753.

Genome annotation databases

EnsemblMetazoaiFBtr0089318; FBpp0088360; FBgn0032720.
GeneIDi35145.
KEGGidme:Dmel_CG10603.

Similar proteinsi

Entry informationi

Entry nameiRM13_DROME
AccessioniPrimary (citable) accession number: Q9VJ38
Secondary accession number(s): B7FNL2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2003
Last sequence update: October 1, 2002
Last modified: October 25, 2017
This is version 125 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families