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Q9VIM6 (Q9VIM6_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
CG10949 EMBL AAF53891.1
Submitted name:
GH22016p EMBL AAL13670.1
Gene names
ORF Names:CG10949 FlyBase FBgn0032858 EMBL AAL13670.1, Dmel_CG10949 EMBL AAF53891.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VIM6 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 39314A5798E9B618

FASTA45953,176
        10         20         30         40         50         60 
MDDDELIKLI ERHPILYDKD CARSVKNAAQ KDAAWKAISQ KLGASERACI TRWKSIRDRF 

        70         80         90        100        110        120 
GKEFRRFQER PDEPTYWDMF PRLLFLKDHY KQGLARNESL DGMRFEPRER KKRTKVDMEQ 

       130        140        150        160        170        180 
ERRRKDEEEE DSQDDLLNEQ LIELVKSHPV LYDRHKIRVS KNLAAKNEAW REISENLNVS 

       190        200        210        220        230        240 
EELCYNRWKK LRDRFGREFR SHQINQSTPI TWRYFNDLLF LGRHFRKGVP LVLENIKRRG 

       250        260        270        280        290        300 
RPPKAGNPSG KTSKQPEGMV ISSGEQIWGA DYPYSTDNDD LEDDLELAYD EEIEILSEAE 

       310        320        330        340        350        360 
QATPYDFILS EATARQDLEP PQQLQVTTTT PATSEEIIHT IARVNPVVEE SSSLPGDSVP 

       370        380        390        400        410        420 
SAAISDKLLT TVIANMETVL QQSRELQAQI HHEQEQEREQ RSTQPANSLL AKAQMLLDGL 

       430        440        450 
SPSERASAER KIVQFLCQCQ IKALDGEEIE DVAPCQVIN

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL13670.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014134 Genomic DNA. Translation: AAF53891.1.
AY058441 mRNA. Translation: AAL13670.1.
RefSeqNP_610032.1. NM_136188.2.
UniGeneDm.4268.

3D structure databases

ProteinModelPortalQ9VIM6.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VIM6. 5 interactions.
MINTMINT-1573066.
STRINGQ9VIM6.

Proteomic databases

PRIDEQ9VIM6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0081367; FBpp0080899; FBgn0032858.
GeneID35310.
KEGGdme:Dmel_CG10949.
UCSCCG10949-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0032858. CG10949.

Phylogenomic databases

eggNOGmeNOG22375.
GeneTreeEMGT00050000007527.
InParanoidQ9VIM6.
OMAASERACI.
OrthoDBEOG405QGK.
PhylomeDBQ9VIM6.

Gene expression databases

ArrayExpressQ9VIM6.
BgeeQ9VIM6.

Family and domain databases

InterProIPR017956. AT_hook_DNA-bd_motif.
IPR006578. MADF-dom.
[Graphical view]
PfamPF10545. MADF_DNA_bdg. 2 hits.
[Graphical view]
SMARTSM00384. AT_hook. 1 hit.
SM00595. MADF. 2 hits.
[Graphical view]
PROSITEPS51029. MADF. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio792899.

Entry information

Entry nameQ9VIM6_DROME
AccessionPrimary (citable) accession number: Q9VIM6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info