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Unreviewed, UniProtKB/TrEMBL Q9VHH8 (Q9VHH8_DROME)

Last modified June 16, 2009. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    CG18005 EMBL AAF54336.1
Submitted name:
    LD21347p EMBL AAL39616.1
Gene names
ORF Names: CG18005 FlyBase FBgn0037660, Dmel_CG18005 EMBL AAF54336.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentnucleus

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VHH8-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6D0D2E8E8CC954CA

FASTA55761,390
        10         20         30         40         50         60 
MSDAHLEAPP SVRLTNDDFR KLLATPRAPP PGSGTSSTSA GGSLATATFA TPSTAPGTTG 

        70         80         90        100        110        120 
LSGEKKKGQS SSERNDLRRK KKNFYAALKK QEDVKLQELS EKYRDRARER RDGANPDYVN 

       130        140        150        160        170        180 
VSTPGHGSST NAYRAVAPDM KSGIDAQERR RRIIQESKFL GGDIQHTHLV KGLDYALLQK 

       190        200        210        220        230        240 
VRSELHSKEA EEEEIAAAVA REKLAEAAAA AEQLEAERRE SEDINAINGA LARNIYNLVQ 

       250        260        270        280        290        300 
ARRSKEVPRN ELFAPGRMAY VIDLDDELGE SDIPTTLKRS KFEVPVSQED VATLTTNDIV 

       310        320        330        340        350        360 
INKLSQILSY LRAGGRNKKN KKRDKDKPLF YEKEVENLRG SSSNGGSSRH ATSSSSNMGG 

       370        380        390        400        410        420 
KSAPLGDNIY DDIGDYQPSA TRPERNRQEQ GKSAPSYFGD GPPEASEEPI ISSIPPPPKI 

       430        440        450        460        470        480 
SKAMAARFAE PEGYAECYPG LEEMNDAIDD SDDEVDYTKM DLGNKKGPIG RWDFDTQEEY 

       490        500        510        520        530        540 
SDYMSTKEAL PKAAFQYGVK MQDGRKTRKN KTEKNEKAEL DREWQKIQTI IQKRKLPKDG 

       550 
GGGGAGGDEP DYKSAKY 

« Hide

References

« Hide 'large scale' references
[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL39616.1.

Cross-references

Sequence databases

AE014297 Genomic DNA. Translation: AAF54336.1.
AY069471 mRNA. Translation: AAL39616.1.
RefSeqNP_649865.1.
UniGeneDm.2111

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ9VHH8. 8 interactions.

Proteomic databases

PRIDEQ9VHH8.

Genome annotation databases

EnsemblFBgn0037660. Drosophila melanogaster. [Contig view]
GeneID41091.
KEGGdme:Dmel_CG18005.
NMPDRfig|7227.3.peg.11817.

Organism-specific databases

FlyBaseFBgn0037660. CG18005.

Phylogenomic databases

HOGENOMQ9VHH8.
OMAQ9VHH8. QEEYSDY.

Gene expression databases

ArrayExpressQ9VHH8.

Family and domain databases

InterProIPR012492. RED_C.
IPR012916. RED_N.
[Graphical view]
PfamPF07807. RED_C. 1 hit.
PF07808. RED_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio822117.

Entry information

Entry nameQ9VHH8_DROME
AccessionPrimary (citable) accession number: Q9VHH8
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information