Unreviewed,
UniProtKB/TrEMBL Q9VHA1 (Q9VHA1_DROME)
Last modified
December 15, 2009.
Version 64.
History...
Clusters with 100%,
90%,
50% identity |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Spermidine synthase, isoform A EMBL AAF54417.1 EC=2.5.1.16 EMBL AAF54417.1 | ||||
| Gene names |
| ||||
| Organism | Drosophila melanogaster (Fruit fly) [Complete proteome] | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora |
Protein attributes
| Sequence length | 287 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Sequence similarities | Belongs to the spermidine/spermine synthase family. RuleBase RU003836V0 |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Transferase RuleBase RU003836V0 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct spermidine synthase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
| ||||||||||||||||||
References
| [1] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| [2] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AE014297 Genomic DNA. Translation: AAF54417.1. | |
| RefSeq | NP_731384.1. |
| UniGene | Dm.20162 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1INL based on UniProtKB Q9WZC2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9VHA1. 1 interaction. |
| STRING | Q9VHA1. |
Proteomic databases | |
| PRIDE | Q9VHA1. |
Genome annotation databases | |
| Ensembl | FBtr0082078; FBpp0081556; FBgn0037723; Drosophila melanogaster. [Genome view] FBtr0082079; FBpp0081557; FBgn0037723; Drosophila melanogaster. [Genome view] |
| GeneID | 41167. |
| UCSC | CG8327-RA. d. melanogaster. |
Organism-specific databases | |
| CTD | 41167. |
| FlyBase | FBgn0037723. SpdS. |
Phylogenomic databases | |
| InParanoid | Q9VHA1. |
| OMA | MEPGPDG. |
| OrthoDB | EOG9DJK38. |
| PhylomeDB | Q9VHA1. |
Gene expression databases | |
| ArrayExpress | Q9VHA1. |
Family and domain databases | |
| InterPro | IPR001045. Sprmine_synthase. [Graphical view] |
| PANTHER | PTHR11558. Sprmine_synthase. 1 hit. |
| Pfam | PF01564. Spermine_synth. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00417. speE. 1 hit. |
| PROSITE | PS01330. SPERMIDINE_SYNTHASE_1. 1 hit. PS51006. SPERMIDINE_SYNTHASE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | Dmel_CG8327. 822519. |
Entry information
| Entry name | Q9VHA1_DROME | ||||||||
| Accession | Primary (citable) accession number: Q9VHA1 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with


