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Q9VGZ6 (Q9VGZ6_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Rfx EMBL AAF54526.2
ORF Names:Dmel_CG6312 EMBL AAF54526.2
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length897 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9VGZ6 [UniParc].

Last modified March 1, 2001. Version 2.
Checksum: 55F2DF1F19BFF7AF

FASTA89798,026
        10         20         30         40         50         60 
MTTRLAPQRQ FILSTRSAIV DATSPPEDSA EEQQQLTVEV ESATNGVITN STTSPPPHAE 

        70         80         90        100        110        120 
QFEFCTEDGV VVSATLEDVM TQVKLFPLLQ NCQLLQKKLV DEDDDSTGVG ATDADQLEVI 

       130        140        150        160        170        180 
SVVLPMDAED STSDAHLHGH VVNSSSDTMG TITTTEPNGT TVTHSIPIHS MADLAAIKDG 

       190        200        210        220        230        240 
VDLAQQVANG QVTVVQTTED DDGTPFITVT VSGQEQNYQV QYVDSELYHS NSSQTQMTYP 

       250        260        270        280        290        300 
FCPVGDYQGN GQTAYYSTTG QYGTTSSAGG SSNGAHSTTL PYLVPVEEGI LLNGSAHSLS 

       310        320        330        340        350        360 
QSQSQSHGRD SPHSLTEVAY IQEAQSTPQT PTSTTTTHSA SGGSLGTGGG GASPDSDQSA 

       370        380        390        400        410        420 
LGSSNKIASA TIKWLSRNYE TADGVSLPRS TLYNHYMQHC SEHKLEPVNA ASFGKLIRSV 

       430        440        450        460        470        480 
FSGLRTRRLG TRGNSKYHYY GIRIKPGSLL NSQAMDDKQM LAAGYGPSSD GTGGPGSGPM 

       490        500        510        520        530        540 
VSVTSSTAGQ LTGSNGLGGG HGQRHSNGTK KHTFKPETYE ACIQYIGDGT SALPSFPPIE 

       550        560        570        580        590        600 
LNHSFNSELT LEDVDTFRGL YREHCESFLD AVLNLEFNTV EFLLRDFWRA SDNNNLDECE 

       610        620        630        640        650        660 
EEKYLSKTKL YLLCHCAEVQ KFVREVDYQF YQNTVDVIIP DVLRSIPNAL TQAIRNFAKN 

       670        680        690        700        710        720 
LEIWLCESML GVPEQLAQIK TSAVSAFCQT LRRYTSLNHL AQAARAVLQN GAQISQMLSD 

       730        740        750        760        770        780 
LNRVDFHNVQ EQAAWVSQCA PAVVQRLESD FKAALQQQSS LEQWASWLQL VVESAMEEYN 

       790        800        810        820        830        840 
GKPTYARAAR QFLLKWSFYS SMIIRDLTLR SASSFGSFHL IRLLFDEYMF YLVEHKIAEA 

       850        860        870        880        890 
QDKTAIAVIC ERMKKDMDFE FECQFAYITS DTEHQTTPSS ASSGGDVGNE AKRLKQE 

« Hide

References

« Hide 'large scale' references
[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014297 Genomic DNA. Translation: AAF54526.2.
RefSeqNP_649999.2. NM_141742.2.
UniGeneDm.3010.

3D structure databases

HSSPHSSP built from PDB template 1DP7 based on UniProtKB P22670.
ProteinModelPortalQ9VGZ6.
SMRQ9VGZ6. Positions 371-445.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9VGZ6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0082238; FBpp0081716; FBgn0020379.
GeneID41266.
KEGGdme:Dmel_CG6312.
NMPDRfig|7227.3.peg.12069.
UCSCCG6312-RA. d. melanogaster.

Organism-specific databases

CTD41266.
FlyBaseFBgn0020379. Rfx.

Phylogenomic databases

GeneTreeEMGT00050000000456.
InParanoidQ9VGZ6.
OMAFEFCTED.
PhylomeDBQ9VGZ6.

Gene expression databases

ArrayExpressQ9VGZ6.
BgeeQ9VGZ6.

Family and domain databases

InterProIPR003150. RFX_DNA-bd.
IPR011991. WHTH_trsnscrt_rep_DNA-bd.
[Graphical view]
Gene3DG3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KOK09173.
PfamPF02257. RFX_DNA_binding. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio823000.

Entry information

Entry nameQ9VGZ6_DROME
AccessionPrimary (citable) accession number: Q9VGZ6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 82 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)