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Q9VGL0 (Q9VGL0_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 99. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length1266 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionLigase EMBL AAG22146.2
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processneurogenesis

Inferred from mutant phenotype PubMed 21549331. Source: FlyBase

   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VGL0 [UniParc].

Last modified October 1, 2002. Version 3.
Checksum: 90A0F4638BEF1D56

FASTA1,266129,866
        10         20         30         40         50         60 
MERRRFNMSS MSPMADSTRI DASLLNNRPA ASNFLRGLSP KGSNTSLNGT RTPERSLMNR 

        70         80         90        100        110        120 
SATSSSTITR QKLNLSQVDP RTFADVHSSG LSSRIVALSE RSGLQRSMSA SNLYNPLTQP 

       130        140        150        160        170        180 
RRAPASPLPY KSRAPTLSIT QIAPPERSFY SGNTLSSLLR SNSLVGLVPK TTEQEQLSRE 

       190        200        210        220        230        240 
NRPILHPPHP QHESEPTRSV LEELKEISRK RINTEDTQQA QDYTKRSCQQ NVDFVDFVAH 

       250        260        270        280        290        300 
HRQQQKLRNL QQQQNQSFKR QRELTVSVPL RHHSTSLSAA SPALQHMNSN GTISPTQSPE 

       310        320        330        340        350        360 
QVAKRPNCSY SNDITSSLSS SCRHSNKRKL LDMRERFQHS KNDTLASGGS SPENSPENVA 

       370        380        390        400        410        420 
KIQRKVDAEA VSKAMSMPVV TVAAVPASRA ISAPAIQKAV PQVTEKPKLT LFNARQSQTI 

       430        440        450        460        470        480 
AEQPRPDLSS PEVDAGEYAG IQFVKPKQQN SMLAAKNPSV ERTHKTKLAI MLSGLKGELY 

       490        500        510        520        530        540 
LGEPDELDAP APKSAPAPVT LPTPVKPIII APVTTSTTTV TSTATISTSA PSKPIILSNQ 

       550        560        570        580        590        600 
VIKPADVPNT NSTGSVPKLV LGQPAPPAKT EQTPPKPIDK VPAAQADIPP KFELSTKPVT 

       610        620        630        640        650        660 
PATSSQPLIS FGTPKSTAAP SFSFGSATNT TSSTIANITN TTTSKPIFSF GQTPANGPTV 

       670        680        690        700        710        720 
GGLSGFKTEA PATTSVSTTN PGTQVTSTTT FGVTPPKTTT TVAPTTTVSL NFGQPMPSFG 

       730        740        750        760        770        780 
AADTGVKPMF SFGKSNNLSS GTPTTNGSDA AAAKPAVFSF GGSTTQPAAA APTPVFGSLS 

       790        800        810        820        830        840 
KPLGEGFASP GANKSETTKP SIFGNLDNGL GNAMKSSTNV AATTAAELPK PFGFAATTTA 

       850        860        870        880        890        900 
AGGGSTATNL FSFGGTATSK AAEPAPASQK NLFGLNATTT TPFAFGGAAA GAADKSENKD 

       910        920        930        940        950        960 
NKPIAFAFGA GNNSAVANPS GVFSFGGTDK SAPPAFGSGT TSVTSATATP TNNTFGFSTT 

       970        980        990       1000       1010       1020 
QKPATPMFGS GSTQQSSTPA VAATKPFTLG GGAPTTPSAS PASGGFSFSA VATKNTTAPT 

      1030       1040       1050       1060       1070       1080 
AGTNLFGSPA SASKPSFNFG GNTATQAAAA GSPAGGFSFA TTTKKEDSAS TNMFGSPNTG 

      1090       1100       1110       1120       1130       1140 
VVKPNFSFSS NNPTPAPTFG GFGAPAAAAP TATSTNQSKP FAFGASTPAA APQPPLGGNL 

      1150       1160       1170       1180       1190       1200 
FANAVSATQN QTKPSGVFSF GAAKSTAGTT AGNAPFSFGG ASAGGIASPP SNQGLNTAKP 

      1210       1220       1230       1240       1250       1260 
FSFGGAGGTP APNVFGSPAP APPASNPTGG FNFGGVSPAQ QANAGNMFAP TPESRPIRKA 


TRRLQK

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAK93388.1.
[3]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014297 Genomic DNA. Translation: AAG22146.2.
AY051964 mRNA. Translation: AAK93388.1.
RefSeqNP_650096.1. NM_141839.3.
UniGeneDm.20766.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ9VGL0. 1 interaction.
MINTMINT-808534.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0082418; FBpp0081894; FBgn0037924.
GeneID41397.
KEGGdme:Dmel_CG14712.
UCSCCG14712-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0037924. CG14712.

Phylogenomic databases

eggNOGNOG12793.
GeneTreeENSGT00700000104544.
InParanoidQ9VGL0.
KOK14316.
OMAISRKRIN.
OrthoDBEOG48SF8Z.

Family and domain databases

InterProIPR026054. Nucleoporin.
IPR026056. Put_NUP_drosophila.
[Graphical view]
PANTHERPTHR23193. PTHR23193. 1 hit.
PTHR23193:SF6. PTHR23193:SF6. 1 hit.
ProtoNetSearch...

Other

GenomeRNAi41397.
NextBio823656.

Entry information

Entry nameQ9VGL0_DROME
AccessionPrimary (citable) accession number: Q9VGL0
Secondary accession number(s): Q960N5
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: May 1, 2013
This is version 99 of the entry and version 3 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info