Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9VGK1 (Q9VGK1_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 102. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
CG18476 EMBL AAF54675.1
Submitted name:
FI03704p EMBL ACJ13165.1
Submitted name:
IP01261p EMBL AAY51570.1
Submitted name:
IP01262p EMBL AAY85108.1
Submitted name:
LD23980p EMBL AAV36987.1
Gene names
Name:CG18476-RA EMBL ACJ13165.1
ORF Names:CG18476 EMBL AAV36987.1 FlyBase FBgn0037931, Dmel_CG18476 EMBL AAF54675.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length936 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentnucleus

Inferred from electronic annotation. Source: InterPro

   Molecular functionnucleic acid binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VGK1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: D443A980A4879FC4

FASTA936109,114
        10         20         30         40         50         60 
MKLPVICRTC DSTDTDNLLK LATPSKKYPD KLLSEILCEL TEINLDATGS QKFPQCLCSG 

        70         80         90        100        110        120 
CTKKLMGAYC YVKQAMAANE LLMKHLKNGA APTSTDCLQE APMELCAEQH VEVKLETEDE 

       130        140        150        160        170        180 
DCGENDVTIT CSELPEPDET DMESKKSVDP LTMIETVKLE MEPRSVEKPA YDDPTSDFED 

       190        200        210        220        230        240 
EDSLDNLPLY NRIQKWKTGR KSVYKCHDCP RSFKRFDFLK RHEMRVHKPE TRLYDCSLCI 

       250        260        270        280        290        300 
RKFSRSEALE AHLKIHRNSK RSANISEHKK AKAVDLNLCK PHGYKLIECM ICQSQYNKIA 

       310        320        330        340        350        360 
DLRRHLEEHP DIVSLCGRPN MEPHELAELF YPDSKDLSEE QLINLIRKDL AAGIYQRFYS 

       370        380        390        400        410        420 
ITNQSGYEMD LDSSETDSDL DGDHDDQHKR RKKSRKATYS CELCQQKFPR KYQLYDHQRQ 

       430        440        450        460        470        480 
SHSWSDAPHV CGRCDGRFVS LQLLRHHNES QCRNAQKRFL CHKCPLRFRW KHNLKTHFRE 

       490        500        510        520        530        540 
HRITNQTFEC SECKRVFDKK KSLTVHLLSV HAEESKLIPC QWCSRKFYRH DYLVKHLKRH 

       550        560        570        580        590        600 
GLKEHDIPLA ETLIAATSRP NGAKRITCRM CNLHFERIVD LRAHIQLELK LSLSLHQSYD 

       610        620        630        640        650        660 
SPHNYSITNE SGFELQLEDS ETEDEMQPGV GSRPVYICEL CSVQCKRKFE MIQHQRTMHR 

       670        680        690        700        710        720 
FDKMPHECDD CIFKCVSKSI MDHHRQGQCS STEKKHACGK CSYKFMWPEN LEQHILLQHS 

       730        740        750        760        770        780 
KSSVSNPTGD RHTQGTGDLE KDATEDGIPL LQCPHCDRTY QMKSRLNNHI RDVHINGDRK 

       790        800        810        820        830        840 
RKEAIKRFLC SLCGMETRSA AALVTHMRRH TGEKPFKCDL CEMAFPRHSE LASHRRMHTG 

       850        860        870        880        890        900 
EKPFHCTVCG KDFARSDKLK RHMLTHSGLK PHKCTYCEKS YRQAKDLKLH LQQHTGECPF 

       910        920        930 
VCGTCGERFI QSSTLEKHRL MRRHFDEVEA WLRRQK

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S.
Submitted (NOV-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Celniker S.
Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Celniker S.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAV36987.1.
[6]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Celniker S.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014297 Genomic DNA. Translation: AAF54675.1.
BT016102 mRNA. Translation: AAV36987.1.
BT022176 mRNA. Translation: AAY51570.1.
BT023708 mRNA. Translation: AAY85108.1.
BT050458 mRNA. Translation: ACJ13165.1.
RefSeqNP_731615.1. NM_169419.1.
UniGeneDm.23315.

3D structure databases

HSSPHSSP built from PDB template 1SP2 based on UniProtKB P08047.
ProteinModelPortalQ9VGK1.
SMRQ9VGK1. Positions 202-309, 393-592, 748-928.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VGK1. 2 interactions.
MINTMINT-344627.

Proteomic databases

PRIDEQ9VGK1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0082443; FBpp0081919; FBgn0037931.
GeneID41404.
KEGGdme:Dmel_CG18476.
NMPDRfig|7227.3.peg.12273.
UCSCCG18476-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0037931. CG18476.

Phylogenomic databases

GeneTreeEMGT00050000001806.
InParanoidQ9VGK1.
OMAEAPMELC.
PhylomeDBQ9VGK1.

Gene expression databases

ArrayExpressQ9VGK1.
BgeeQ9VGK1.

Family and domain databases

InterProIPR012934. Znf_AD.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
Gene3DG3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 9 hits.
PfamPF07776. zf-AD. 1 hit.
PF00096. zf-C2H2. 12 hits.
[Graphical view]
SMARTSM00868. zf-AD. 2 hits.
SM00355. ZnF_C2H2. 16 hits.
[Graphical view]
PROSITEPS00028. ZINC_FINGER_C2H2_1. 14 hits.
PS50157. ZINC_FINGER_C2H2_2. 13 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio823696.

Entry information

Entry nameQ9VGK1_DROME
AccessionPrimary (citable) accession number: Q9VGK1
Secondary accession number(s): Q9VGK2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info