Q9VFQ3 (Q9VFQ3_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
E5 EMBL AAF54997.1

Submitted name:
FI01131p EMBL ACJ13132.1

Gene names

Name:	E5 EMBL AAF54997.1 FlyBase FBgn0008646
Synonyms:	E5-RA EMBL ACJ13132.1
ORF Names:	Dmel_CG9930 EMBL AAF54997.1

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682.

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000682
Domain	Homeobox RuleBase RU000682
Ligand	DNA-binding RuleBase RU000682
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9VFQ3 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: F4991FA9F452A7FE	FASTA	524	57,960
	10 20 30 40 50 60 MVTCGRQTFN MLPMAPTSPF VSSSSSVAAS STSVSASSTV SASASSKPKL AFSIDSIVGE 70 80 90 100 110 120 SSTRSAPLRV SVISSPPPRS ESPASPTNTN NSGRRTPRGY IYCRRRDSLD RSRSPQRSPV 130 140 150 160 170 180 SRSPSPPNAG GNPAAAGNTA KSGDPSSGTG NPPTLIRPLP LPAPNLALIG NRTSPNAMAV 190 200 210 220 230 240 RMAGPPHPPS QPPPFLAAQF QMAAALAHHH QQQQQQQQQQ LPPVPTGPPH GPHPHLPPGQ 250 260 270 280 290 300 IPLGIFPGGP HPGHPPPHGH HPFGSAPHLI RDSYPLYPWL LSRHGRIFPR FPGNFLFQPF 310 320 330 340 350 360 RKPKRVRTAF SPTQLLKLEH AFEGNHYVVG AERKQLAQGL SLTETQVKVW FQNRRTKHKR 370 380 390 400 410 420 MQQEGGDGSD TKSNKGSSSG GGGGGDGEDD AKHDGSQHSY EDAEDPEDED EIEEDDEDEV 430 440 450 460 470 480 IDMDDYGSEM DAEEHQRLRE QFQQQLAQHQ QQFMQQNAGE AATLSPQQQH QLLQQHQQHL 490 500 510 520 QQQHHQQQQH FIQQQQQLYL RERERERERE REREREKSRE RENQ

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley.
[3]	Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S. Submitted (NOV-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014297 Genomic DNA. Translation: AAF54997.1. BT050425 mRNA. Translation: ACJ13132.1.
RefSeq	NP_524825.1. NM_080086.2.
3D structure databases
HSSP	HSSP built from PDB template 1IG7 based on UniProtKB P13297.
ProteinModelPortal	Q9VFQ3.
SMR	Q9VFQ3. Positions 274-361.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9VFQ3. 12 interactions.
MINT	MINT-743145.
STRING	Q9VFQ3.
Proteomic databases
PRIDE	Q9VFQ3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0082880; FBpp0082343; FBgn0008646.
GeneID	45396.
KEGG	dme:Dmel_CG9930.
NMPDR	fig|7227.3.peg.12681.
UCSC	CG9930-RA. d. melanogaster.
Organism-specific databases
CTD	45396.
FlyBase	FBgn0008646. E5.
Phylogenomic databases
eggNOG	inNOG09996.
GeneTree	EMGT00070000025707.
InParanoid	Q9VFQ3.
OMA	HGRIFPR.
OrthoDB	EOG46DJK9.
PhylomeDB	Q9VFQ3.
Gene expression databases
ArrayExpress	Q9VFQ3.
Bgee	Q9VFQ3.
Family and domain databases
InterPro	IPR001356. Homeobox. IPR017970. Homeobox_CS. IPR009057. Homeodomain-like. IPR012287. Homeodomain-rel. [Graphical view]
Gene3D	G3DSA:1.10.10.60. Homeodomain-rel. 1 hit.
KO	K09317.
Pfam	PF00046. Homeobox. 1 hit. [Graphical view]
SMART	SM00389. HOX. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS00027. HOMEOBOX_1. 1 hit. PS50071. HOMEOBOX_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	838115.

Entry information

Entry name

Q9VFQ3_DROME

Accession

Primary (citable) accession number: Q9VFQ3

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 96 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)