Unreviewed, UniProtKB/TrEMBL Q9VDN4 (Q9VDN4_DROME)

Names and origin

Protein names

Submitted name:
    CG4360, isoform A EMBL AAF55756.1

Gene names

ORF Names:

CG4360 FlyBase FBgn0038787, Dmel_CG4360 EMBL AAF55756.1

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	556 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q9VK57	1	EBI-136680,EBI-170636

Sequences

	Sequence		Length	Mass (Da)
	Q9VDN4-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 48E41F209969E95D	FASTA	556	60,441
	10 20 30 40 50 60 MHLNHATAAT AAMANYQHYQ LPASHGGGGG GGGGGGGGGG SNGGSGPGPN SGQQQPTTLA 70 80 90 100 110 120 SLQQSPFALH QLTAVQAIQH PTHQAMLHPQ HPLVHLLDIS TTTANSGGGG GGSHTPISPM 130 140 150 160 170 180 KQEVQSVISE EEVVVDDPRK KKQCHVCKNK FRQLTTLRNH MKIHTDERPY KCKHCDKAFR 190 200 210 220 230 240 QISTLTNHVK IHTGEKPFTC NICAKDFRQQ STLINHIKTH KAAESSTPTS LLNYQPQTGS 250 260 270 280 290 300 GKHRKSQMHQ AYQQQHQRVQ ISKTLYSGSY SSPAAEELVK PFQCSVCKRR FPQLSTLHNH 310 320 330 340 350 360 ERTHIDPKPY KCETCDKSFS QLATLANHKK IHTGDKPYTC SYCHMQFRQQ STLTNHLKTH 370 380 390 400 410 420 THQIAPGGVG GAGGGGGAVT ATVDHSMPAP LAPGTQQLTS GLLPNNLHGS TANIIQLDHH 430 440 450 460 470 480 PLLHFLDGST TVSSVVATAA ANTKVEHFQA GGSPSGRMTV VGTINMLKGD NPDRPFGCSV 490 500 510 520 530 540 CQRFFSQQST LVNHIKTHTG EKPYKCKICE VNFRQVATLN NHMKIHTGEK PYNCSFCPKQ 550 FRQKSTLQNH LRVHTC

References

[1]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[3]	"Phosphoproteome analysis of Drosophila melanogaster embryos." Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P. J. Proteome Res. 7:1675-1682(2008) [PubMed: 18327897] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE014297 Genomic DNA. Translation: AAF55756.1.
RefSeq	NP_650879.1.
UniGene	Dm.10989
3D structure databases
HSSP	HSSP built from PDB template 1F2I based on UniProtKB P08046.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9VDN4. 2 interactions.
Proteomic databases
PRIDE	Q9VDN4.
Genome annotation databases
Ensembl	FBgn0038787. Drosophila melanogaster. [Contig view]
GeneID	42413.
NMPDR	fig|7227.3.peg.13705.
Organism-specific databases
FlyBase	FBgn0038787. CG4360.
Phylogenomic databases
HOGENOM	Q9VDN4.
OMA	Q9VDN4. FRQQSTL.
Gene expression databases
ArrayExpress	Q9VDN4.
Family and domain databases
InterPro	IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
Gene3D	G3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 7 hits.
Pfam	PF00096. zf-C2H2. 9 hits. [Graphical view]
ProDom	PD000003. Znf_C2H2. 5 hits. [Graphical view] [Entries sharing at least one domain]
SMART	SM00355. ZnF_C2H2. 9 hits. [Graphical view]
PROSITE	PS00028. ZINC_FINGER_C2H2_1. 9 hits. PS50157. ZINC_FINGER_C2H2_2. 9 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	828663.

Entry information

Entry name

Q9VDN4_DROME

Accession

Primary (citable) accession number: Q9VDN4

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)