Unreviewed, UniProtKB/TrEMBL Q9VD60 (Q9VD60_DROME)

Names and origin

Protein names

Submitted name:
    Eip93F, isoform A EMBL AAF55940.3
Submitted name:
    GH10557p EMBL ABX00715.1

Gene names

Name:	Eip93F EMBL AAF55940.3 FlyBase FBgn0013948
ORF Names:	Dmel_CG18389 EMBL AAF55940.3

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1165 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	autophagy Inferred from mutant phenotype. Source: FlyBase ecdysone-mediated induction of salivary gland cell autophagic cell death Traceable author statement. Source: FlyBase induction of apoptosis by hormones Inferred from mutant phenotype. Source: FlyBase larval midgut histolysis Traceable author statement. Source: FlyBase phagocytosis, engulfment Traceable author statement. Source: FlyBase positive regulation of transcription, DNA-dependent Traceable author statement. Source: FlyBase
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro polytene chromosome Non-traceable author statement. Source: FlyBase
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9VD60-1 [UniParc]. Last modified October 1, 2002. Version 3. Checksum: A2556014070BED8D	FASTA	1,165	123,976
	10 20 30 40 50 60 MHISSYEISL ERVAEECMGR RQWKHYQDKL TCSHLNIEEQ QPIAIAGSED EPSQYNHSSK 70 80 90 100 110 120 EISQSNPNHC KTENHRLEQQ HNGSQLLEEE DSENNQTSHD SSRTPTPGAT STPSPPPEPI 130 140 150 160 170 180 DWRPSAKCNF CVNGRLLTVN AQGKLVAESA ATATSSSTSN SHIHQHDSDS NSSASLPHHI 190 200 210 220 230 240 SSSSSSNNNS SGNRARHIAA ASARATPAAA TPANSLELYK LLTQRAAKMT SMDSMAAQLA 250 260 270 280 290 300 QFSLLADFNL INSLASQQQQ QQQQQIASAV TPTTSEVSAA AISPALKDTP SPSVDAPLDL 310 320 330 340 350 360 SSKPSPNSSI SGDVKSVRAC ATPTPSGRRA YSEEDLSRAL QDVVANKLDA RKSASQHHEQ 370 380 390 400 410 420 RSILDNRLFK MKHHDQEQDH DGDELEDSND DAEAEVDSNA STPVYPAEFA RAQLRKLSHL 430 440 450 460 470 480 SEHNGSDLGE DVDRGSPKMG RHPACGNASA NQGAPPSIPL DANVLLHTLM LAAGIGAMPK 490 500 510 520 530 540 LDETQTVGDF IKGLLVANSG GIMNEGLLNL LSASQENSNG NASLLLQQQQ HQQHHQQHHQ 550 560 570 580 590 600 QQQQQQHVAA YRHRLPKSET PETNSSLDPN DASEDPILKI PSFKVSGPAS SSSLSPGGLV 610 620 630 640 650 660 GGHHHPLNNN NSLSISNNSN HSSNSHRNGS NRSPHSASPM LAAAVAQGGY SAGNSLLTSS 670 680 690 700 710 720 SSSIQKMMAS NIQRQINEQS GQESLRNGNV SDCSSNNGGS SSLGYKKPSI SVAKIIGGTD 730 740 750 760 770 780 TSRFGASPNL LSQQHHSAHH LTHQQQQQQL SAQEALGKGT RPKRGKYRNY DRDSLVEAVK 790 800 810 820 830 840 AVQRGEMSVH RAGSYYGVPH STLEYKVKER HLMRPRKREP KPQPDLVGLT GPANKLQLDK 850 860 870 880 890 900 LKAGPHGGSK LSNALKNQNN QAAAAAAAAA AAAAAATPNG LKLPLFEAGP QALSFQPNMF 910 920 930 940 950 960 WPQTNATNAY GLDFNRITEA MRNPQASNHH GLMKSAQDMV ENVYDGIIRK TLQASEGNGS 970 980 990 1000 1010 1020 AAGNGSNGSN GNGHGHGHGH GHALLDQLLV KKTPLPFTNH RNNDYAATCS SASGESVKRS 1030 1040 1050 1060 1070 1080 GSPMGNYADI KRERLSADSG GSSDEEHSAS HINNNNSDLA HNKNKSGGGG GGGGNGQTNG 1090 1100 1110 1120 1130 1140 NGRSSRMTSR DDSETDASSL KSGESGGQQN HKMMDLNGGS SSSSHIKCES EAATGHHSPG 1150 1160 HHTTSILHEK LAQIKAEQVD QADQL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[3]	Stapleton M., Carlson J., Frise E., Kapadia B., Park S., Wan K., Yu C., Celniker S. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley EMBL ABX00715.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE014297 Genomic DNA. Translation: AAF55940.3. BT031093 mRNA. Translation: ABX00715.1.
RefSeq	NP_652002.2.
UniGene	Dm.21704
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	FBgn0013948. Drosophila melanogaster. [Contig view]
GeneID	44936.
NMPDR	fig|7227.3.peg.13990.
Organism-specific databases
FlyBase	FBgn0013948. Eip93F.
Family and domain databases
InterPro	IPR007889. HTH_psq. IPR011526. HTH_psq-like. [Graphical view]
Pfam	PF05225. HTH_psq. 1 hit. [Graphical view]
PROSITE	PS50960. HTH_PSQ. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	837839.

Entry information

Entry name

Q9VD60_DROME

Accession

Primary (citable) accession number: Q9VD60

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	October 1, 2002
Last modified:	July 7, 2009
This is version 46 of the entry and version 3 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)