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Protein

Protein UBASH3A homolog

Gene

CG13604

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein UBASH3A homolog
Gene namesi
ORF Names:CG13604
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000000803 Componenti: Chromosome 3R

Organism-specific databases

FlyBaseiFBgn0039137. CG13604.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 751751Protein UBASH3A homologPRO_0000210995Add
BLAST

Proteomic databases

PaxDbiQ9VCE9.
PRIDEiQ9VCE9.

Expressioni

Gene expression databases

BgeeiQ9VCE9.
GenevisibleiQ9VCE9. DM.

Interactioni

Protein-protein interaction databases

BioGridi67775. 4 interactions.
DIPiDIP-21366N.
IntActiQ9VCE9. 1 interaction.
MINTiMINT-341393.
STRINGi7227.FBpp0303396.

Structurei

3D structure databases

ProteinModelPortaliQ9VCE9.
SMRiQ9VCE9. Positions 18-68, 266-343, 492-745.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 6045UBAPROSITE-ProRule annotationAdd
BLAST
Domaini271 – 33666SH3PROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni490 – 751262Phosphatase-likeAdd
BLAST

Sequence similaritiesi

Contains 1 SH3 domain.PROSITE-ProRule annotation
Contains 1 UBA domain.PROSITE-ProRule annotation

Keywords - Domaini

SH3 domain

Phylogenomic databases

eggNOGiNOG276661.
GeneTreeiENSGT00390000018249.
InParanoidiQ9VCE9.
KOiK18993.
OrthoDBiEOG7P5T0D.
PhylomeDBiQ9VCE9.

Family and domain databases

Gene3Di3.40.50.1240. 3 hits.
3.90.1140.10. 1 hit.
InterProiIPR013078. His_Pase_superF_clade-1.
IPR029033. His_PPase_superfam.
IPR009097. RNA_ligase/cNuc_Pdiesterase.
IPR001452. SH3_domain.
IPR009060. UBA-like.
IPR015940. UBA/transl_elong_EF1B_N_euk.
IPR000449. UBA/Ts_N.
[Graphical view]
PfamiPF00300. His_Phos_1. 1 hit.
PF14604. SH3_9. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SMARTiSM00855. PGAM. 1 hit.
SM00326. SH3. 1 hit.
SM00165. UBA. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
SSF50044. SSF50044. 1 hit.
SSF53254. SSF53254. 2 hits.
PROSITEiPS50002. SH3. 1 hit.
PS50030. UBA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9VCE9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATLPPRKSQ TPTRICISKQ HLTPLQTLLQ MGFPRHRAEK ALASTGNRGV
60 70 80 90 100
QIASDWLLAH VNDGTLDECA PREYIIYACP TGPFLQQLEE FWAKSRQMCG
110 120 130 140 150
WNGAHNYVPH ITLVSFFKAP DECSLQLSKA LKQVVDMTGA LLDRPLKLEP
160 170 180 190 200
YMSQNFMGFF VAEEDANYLK RLALQYVKEV SNSIISDTYE QLDAIVACFP
210 220 230 240 250
WCGAVSSGTR CIPRSSRSIS LEPHVKSLHL TLAYQFPQAQ FNALKALVET
260 270 280 290 300
LDASCASNWE LRLYSRDPRL ATKQVQKVVY PHNPHETDEL ELRIGDYIYL
310 320 330 340 350
NTEVVDSSSD GWAEGISWLT GSTGHLPVNY TERTAESDAW TLHRVVQLSK
360 370 380 390 400
SVASSLTSAE DLDIVDGRSI STEPDDRQNT AHPDIIEGSS FEESEQSVEK
410 420 430 440 450
YLRQTLKPCL ELPSVQLLNS HNLTHQHNPN TPTIEITTNM SSSSTSMSKQ
460 470 480 490 500
PVDEILVEPP AAQPPRPDDT LSVHSDHSLH PGSLDASHAK NRKIYIMRHG
510 520 530 540 550
ERVDFTFGTW IPYCFDEFGN YMRKDLNMPK TLPRRKNSPE GWQNDSPLTN
560 570 580 590 600
VGVYQANLIG QALLEAQVQI DHVYCSPSYR CIQTCTSALE GLKLTGKQKI
610 620 630 640 650
KLEPGLFEWM AWYPSGVPDW LTKNELTEAK FDVDLDYEPV QPASELTARL
660 670 680 690 700
KESTEQFYER NHDVILQLLE QTTGNILVVA HATTLDTCSR QLTGGVPRST
710 720 730 740 750
NELRQVIHKI PYCSLATVEQ VDGVWKLVEP ECLPVTHSKN PRFEWNALSA

T
Length:751
Mass (Da):84,466
Last modified:May 1, 2000 - v1
Checksum:iFF893BB3FEDFDB2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014297 Genomic DNA. Translation: AAF56217.1.
AY051411 mRNA. Translation: AAK92835.1.
RefSeqiNP_651202.1. NM_142945.3.
UniGeneiDm.4624.

Genome annotation databases

EnsemblMetazoaiFBtr0084509; FBpp0083896; FBgn0039137.
GeneIDi42840.
KEGGidme:Dmel_CG13604.
UCSCiCG13604-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014297 Genomic DNA. Translation: AAF56217.1.
AY051411 mRNA. Translation: AAK92835.1.
RefSeqiNP_651202.1. NM_142945.3.
UniGeneiDm.4624.

3D structure databases

ProteinModelPortaliQ9VCE9.
SMRiQ9VCE9. Positions 18-68, 266-343, 492-745.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi67775. 4 interactions.
DIPiDIP-21366N.
IntActiQ9VCE9. 1 interaction.
MINTiMINT-341393.
STRINGi7227.FBpp0303396.

Proteomic databases

PaxDbiQ9VCE9.
PRIDEiQ9VCE9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0084509; FBpp0083896; FBgn0039137.
GeneIDi42840.
KEGGidme:Dmel_CG13604.
UCSCiCG13604-RA. d. melanogaster.

Organism-specific databases

FlyBaseiFBgn0039137. CG13604.

Phylogenomic databases

eggNOGiNOG276661.
GeneTreeiENSGT00390000018249.
InParanoidiQ9VCE9.
KOiK18993.
OrthoDBiEOG7P5T0D.
PhylomeDBiQ9VCE9.

Miscellaneous databases

GenomeRNAii42840.
NextBioi830850.
PROiQ9VCE9.

Gene expression databases

BgeeiQ9VCE9.
GenevisibleiQ9VCE9. DM.

Family and domain databases

Gene3Di3.40.50.1240. 3 hits.
3.90.1140.10. 1 hit.
InterProiIPR013078. His_Pase_superF_clade-1.
IPR029033. His_PPase_superfam.
IPR009097. RNA_ligase/cNuc_Pdiesterase.
IPR001452. SH3_domain.
IPR009060. UBA-like.
IPR015940. UBA/transl_elong_EF1B_N_euk.
IPR000449. UBA/Ts_N.
[Graphical view]
PfamiPF00300. His_Phos_1. 1 hit.
PF14604. SH3_9. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SMARTiSM00855. PGAM. 1 hit.
SM00326. SH3. 1 hit.
SM00165. UBA. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
SSF50044. SSF50044. 1 hit.
SSF53254. SSF53254. 2 hits.
PROSITEiPS50002. SH3. 1 hit.
PS50030. UBA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  2. Cited for: GENOME REANNOTATION.
    Strain: Berkeley.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Berkeley.
    Tissue: Head.

Entry informationi

Entry nameiUBS3A_DROME
AccessioniPrimary (citable) accession number: Q9VCE9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: June 24, 2015
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.