Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9VCE9 (UBS3A_DROME) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 95. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein UBASH3A homolog
Gene names
ORF Names:CG13604
OrganismDrosophila melanogaster (Fruit fly) [Reference proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora ›

Protein attributes

Sequence length751 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 SH3 domain.

Contains 1 UBA domain.

Ontologies

Keywords
   DomainSH3 domain
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 751751Protein UBASH3A homolog
PRO_0000210995

Regions

Domain16 – 6045UBA
Domain271 – 33666SH3
Region490 – 751262Phosphatase-like

Sequences

Sequence LengthMass (Da)Tools
Q9VCE9 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: FF893BB3FEDFDB2D

FASTA75184,466
        10         20         30         40         50         60 
MATLPPRKSQ TPTRICISKQ HLTPLQTLLQ MGFPRHRAEK ALASTGNRGV QIASDWLLAH 

        70         80         90        100        110        120 
VNDGTLDECA PREYIIYACP TGPFLQQLEE FWAKSRQMCG WNGAHNYVPH ITLVSFFKAP 

       130        140        150        160        170        180 
DECSLQLSKA LKQVVDMTGA LLDRPLKLEP YMSQNFMGFF VAEEDANYLK RLALQYVKEV 

       190        200        210        220        230        240 
SNSIISDTYE QLDAIVACFP WCGAVSSGTR CIPRSSRSIS LEPHVKSLHL TLAYQFPQAQ 

       250        260        270        280        290        300 
FNALKALVET LDASCASNWE LRLYSRDPRL ATKQVQKVVY PHNPHETDEL ELRIGDYIYL 

       310        320        330        340        350        360 
NTEVVDSSSD GWAEGISWLT GSTGHLPVNY TERTAESDAW TLHRVVQLSK SVASSLTSAE 

       370        380        390        400        410        420 
DLDIVDGRSI STEPDDRQNT AHPDIIEGSS FEESEQSVEK YLRQTLKPCL ELPSVQLLNS 

       430        440        450        460        470        480 
HNLTHQHNPN TPTIEITTNM SSSSTSMSKQ PVDEILVEPP AAQPPRPDDT LSVHSDHSLH 

       490        500        510        520        530        540 
PGSLDASHAK NRKIYIMRHG ERVDFTFGTW IPYCFDEFGN YMRKDLNMPK TLPRRKNSPE 

       550        560        570        580        590        600 
GWQNDSPLTN VGVYQANLIG QALLEAQVQI DHVYCSPSYR CIQTCTSALE GLKLTGKQKI 

       610        620        630        640        650        660 
KLEPGLFEWM AWYPSGVPDW LTKNELTEAK FDVDLDYEPV QPASELTARL KESTEQFYER 

       670        680        690        700        710        720 
NHDVILQLLE QTTGNILVVA HATTLDTCSR QLTGGVPRST NELRQVIHKI PYCSLATVEQ 

       730        740        750 
VDGVWKLVEP ECLPVTHSKN PRFEWNALSA T

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
[3]"A Drosophila full-length cDNA resource."
Stapleton M., Carlson J.W., Brokstein P., Yu C., Champe M., George R.A., Guarin H., Kronmiller B., Pacleb J.M., Park S., Wan K.H., Rubin G.M., Celniker S.E.
Genome Biol. 3:RESEARCH0080.1-RESEARCH0080.8(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Berkeley.
Tissue: Head.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014297 Genomic DNA. Translation: AAF56217.1.
AY051411 mRNA. Translation: AAK92835.1.
RefSeqNP_651202.1. NM_142945.3.
UniGeneDm.4624.

3D structure databases

ProteinModelPortalQ9VCE9.
SMRQ9VCE9. Positions 18-68, 266-343, 492-745.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-21366N.
IntActQ9VCE9. 1 interaction.
MINTMINT-341393.

Proteomic databases

PaxDbQ9VCE9.
PRIDEQ9VCE9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0084509; FBpp0083896; FBgn0039137.
GeneID42840.
KEGGdme:Dmel_CG13604.
UCSCCG13604-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0039137. CG13604.

Phylogenomic databases

eggNOGNOG276661.
GeneTreeENSGT00390000018249.
InParanoidQ9VCE9.
OMALSMGFPK.
OrthoDBEOG4ZCRKK.
PhylomeDBQ9VCE9.

Gene expression databases

BgeeQ9VCE9.
GermOnlineCG13604. Drosophila melanogaster.

Family and domain databases

InterProIPR013078. His_Pase_superF_clade-1.
IPR001452. SH3_domain.
IPR009060. UBA-like.
IPR000449. UBA/transl_elong_EF1B_N.
IPR015940. UBA/transl_elong_EF1B_N_euk.
[Graphical view]
PfamPF00300. His_Phos_1. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SMARTSM00855. PGAM. 1 hit.
SM00326. SH3. 1 hit.
SM00165. UBA. 1 hit.
[Graphical view]
SUPFAMSSF50044. SH3. 1 hit.
SSF46934. UBA_like. 1 hit.
PROSITEPS50002. SH3. 1 hit.
PS50030. UBA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi42840.
NextBio830850.

Entry information

Entry nameUBS3A_DROME
AccessionPrimary (citable) accession number: Q9VCE9
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Relevant documents

Drosophila

Drosophila: entries, gene names and cross-references to FlyBase

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents