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Protein

60S ribosomal protein L27

Gene

RpL27

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • cytoplasmic translation Source: FlyBase

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-DME-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DME-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DME-72689. Formation of a pool of free 40S subunits.
R-DME-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DME-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DME-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27UniRule annotation
Gene namesi
Name:RpL27Imported
Synonyms:chr3R:21510055..21510241Imported, Dmel\CG4759Imported, RPL27Imported, RpL27eImported
ORF Names:CG4759Imported, Dmel_CG4759Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3R

Organism-specific databases

FlyBaseiFBgn0039359. RpL27.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiFBgn0039359.

Interactioni

Protein-protein interaction databases

MINTiMINT-869626.
STRINGi7227.FBpp0303780.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V6Welectron microscopy6.00CZ1-135[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 31KOWInterPro annotationAdd BLAST28

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL27 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3418. Eukaryota.
COG2163. LUCA.
GeneTreeiENSGT00390000010721.
KOiK02901.
OMAiRYPRKVH.
OrthoDBiEOG091G0YBM.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiView protein in InterPro
IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like_sf.
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiView protein in Pfam
PF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD009396. Ribosomal_L27e. 1 hit.
SMARTiView protein in SMART
SM00739. KOW. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiView protein in PROSITE
PS01107. RIBOSOMAL_L27E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9VBN5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKIMKQGKI VIVLSGRYAG RKAIIVKTHD DGTPEKPFGH ALVAGIDRYP
60 70 80 90 100
RKVTKKMGKN KLKKKSKVKP FLKSLNYNHL MPTRYTAHDI SFEKLSPKDL
110 120 130
KDPVKRKTHR FQTRVKFESV YKEGKNKWFF QKLRF
Length:135
Mass (Da):15,903
Last modified:May 1, 2000 - v1
Checksum:i1B503E664E77BCD1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei135Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014297 Genomic DNA. Translation: AAF56495.1.
AY070827 mRNA. Translation: AAL48449.1.
AE014297 Genomic DNA. Translation: AGB96346.1.
AE014297 Genomic DNA. Translation: AGB96347.1.
AE014297 Genomic DNA. Translation: AGB96348.1.
KX531833 mRNA. Translation: ANY27643.1.
RefSeqiNP_001262966.1. NM_001276037.1.
NP_001262967.1. NM_001276038.1.
NP_001262968.1. NM_001276039.1.
NP_651417.1. NM_143160.2.
UniGeneiDm.6265.

Genome annotation databases

EnsemblMetazoaiFBtr0084932; FBpp0084306; FBgn0039359.
FBtr0331360; FBpp0303778; FBgn0039359.
FBtr0331361; FBpp0303779; FBgn0039359.
FBtr0331362; FBpp0303780; FBgn0039359.
GeneIDi43103.
KEGGidme:Dmel_CG4759.

Similar proteinsi

Entry informationi

Entry nameiQ9VBN5_DROME
AccessioniPrimary (citable) accession number: Q9VBN5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: November 22, 2017
This is version 135 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported