Q9VAW5 (LARP_DROME) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
La-related protein

Alternative name(s):
dlarp

Gene names

Name:	larp
ORF Names:	CG42551

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1673 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Cytoplasm Ref.1 Ref.5.
Developmental stage	At the end of embryogenesis, accumulates in the gut and muscles. Ref.1
Sequence similarities	Contains 1 HTH La-type RNA-binding domain.
Sequence caution	The sequence AAF35862.1 differs from that shown. Reason: Unusual initiator. The initiator methionine is coded by a non-canonical ATA isoleucine codon. The sequence AAM29658.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence AAM29658.1 differs from that shown. Reason: Unusual initiator. The initiator methionine is coded by a non-canonical ATA isoleucine codon. The sequence AAM29658.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence. The sequence AAM49837.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Ontologies

Keywords
Cellular component	Cytoplasm
Coding sequence diversity	Alternative splicing
Ligand	RNA-binding
PTM	Phosphoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	mitochondrion inheritance Inferred from mutant phenotype. Source: FlyBase salivary gland cell autophagic cell death Inferred from expression pattern. Source: FlyBase spindle assembly involved in male meiosis Inferred from mutant phenotype. Source: FlyBase syncytial blastoderm mitotic cell cycle Inferred from mutant phenotype. Source: FlyBase
Cellular component	cytosol Inferred from direct assay Ref.5. Source: FlyBase
Molecular function	RNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Alternative products

This entry describes 3 isoforms produced by alternative splicing. [Align] [Select]

Isoform D (identifier: Q9VAW5-3)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

Note: No experimental confirmation available.

Isoform C (identifier: Q9VAW5-1)

The sequence of this isoform differs from the canonical sequence as follows:
     1-270: Missing.
     271-271: I → M

Isoform A (identifier: Q9VAW5-2)

Also known as: B; E;

The sequence of this isoform differs from the canonical sequence as follows:
     1-708: Missing.

Note: No experimental confirmation available.

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 1673	1673	La-related protein		PRO_0000207613
Regions
	Domain	723 – 814	92	HTH La-type RNA-binding
	Compositional bias	296 – 301	6	Poly-Gln
	Compositional bias	322 – 329	8	Poly-Gln
	Compositional bias	332 – 339	8	Poly-Thr
	Compositional bias	340 – 354	15	Poly-Ala
	Compositional bias	372 – 380	9	Poly-Thr
	Compositional bias	480 – 487	8	Poly-Thr
	Compositional bias	869 – 874	6	Poly-Pro
	Compositional bias	985 – 988	4	Poly-Gln
	Compositional bias	996 – 1001	6	Poly-Asn
	Compositional bias	1042 – 1055	14	Poly-Thr
	Compositional bias	1221 – 1225	5	Poly-Pro
	Compositional bias	1543 – 1553	11	Poly-Gln
	Compositional bias	1620 – 1623	4	Poly-Gln
	Compositional bias	1665 – 1671	7	Poly-Ser
Amino acid modifications
	Modified residue	284	1	Phosphoserine Ref.7
	Modified residue	562	1	Phosphoserine Ref.6
	Modified residue	608	1	Phosphoserine Ref.7
	Modified residue	851	1	Phosphoserine Ref.6
	Modified residue	1119	1	Phosphoserine Ref.7
	Modified residue	1124	1	Phosphoserine Ref.7
	Modified residue	1261	1	Phosphoserine Ref.7
	Modified residue	1315	1	Phosphotyrosine Ref.7
	Modified residue	1510	1	Phosphoserine Ref.7
	Modified residue	1512	1	Phosphoserine Ref.7
	Modified residue	1578	1	Phosphoserine Ref.7
	Modified residue	1585	1	Phosphoserine Ref.7
	Modified residue	1610	1	Phosphoserine Ref.7
Natural variations
	Alternative sequence	1 – 708	708	Missing in isoform A.		VSP_015117
	Alternative sequence	1 – 270	270	Missing in isoform C.		VSP_041775
	Alternative sequence	271	1	I → M in isoform C.		VSP_041776
Experimental info
	Sequence conflict	369	1	P → A in AAM29658. Ref.4
	Sequence conflict	476	1	P → S in AAF35862. Ref.1
	Sequence conflict	489	1	S → R in AAF35862. Ref.1
	Sequence conflict	512	1	A → E in AAM29658. Ref.4
	Sequence conflict	641	1	T → A in AAM29658. Ref.4
	Sequence conflict	668	1	S → T in AAM29658. Ref.4
	Sequence conflict	677	1	Y → H in AAM29658. Ref.4
	Sequence conflict	819	1	N → T in AAF35862. Ref.1
	Sequence conflict	819	1	N → T in AAM29658. Ref.4
	Sequence conflict	1100	1	L → V in AAF35862. Ref.1
	Sequence conflict	1648	1	T → A in AAF35862. Ref.1
	Sequence conflict	1648	1	T → A in AAM49837. Ref.4

Sequences

	Sequence		Length	Mass (Da)
	Isoform D [UniParc]. Last modified September 21, 2011. Version 5. Checksum: D865CDA3103B1429	FASTA	1,673	178,145
	10 20 30 40 50 60 MSSKEETPST GGAAPVATVA ASGSATTSYA NVVQNLETKK SGTSNTTTTT ARATVDNKEN 70 80 90 100 110 120 QPNLKSFKSW SEEAAAAEAA GESPIVGSVS LAQTGEKRAA ASGGDNTAEN SSELDDNNDF 130 140 150 160 170 180 VPVLSHHRRD RKKARKEKPR DQQPAGGRGD GQKPQQAGGR RVPGSSDTER KSVRPRAPRG 190 200 210 220 230 240 GSPRKSAAGA AGAAGSNAGA VSSAVPGGPK VHKDRKDTSP SASIEGAGSS GNEAKSADGD 250 260 270 280 290 300 QQAGEKGAAG AAPPPKRFIA APPPKVNAWK ISAKQSGSPK AGTSPLDKRV LQPKAQQQQQ 310 320 330 340 350 360 QTKQTASQNN NAQNTASNKK TQQQQQPQQG ATTTTQTTTA AAAAATAAAA ATAATTSAAA 370 380 390 400 410 420 ATSSAAAVPA ATTETATTTT VDASQADALA KVVVKDKKKV NQKASDFSNV GDWPTLIGGT 430 440 450 460 470 480 SGSGKATSNE PKRNPTKKQQ SAKTAAAVAA SSNTTSSEVA TESNVAGTTS SSNSNPSSST 490 500 510 520 530 540 TTTNTTTNSQ ATTAPVASTS HDAKAQRDAE PAANSAAGTT GTAAGPALTK KIPKHKWRPL 550 560 570 580 590 600 PIDLAKSSRP KPIGGRPNRR FSDDIADQRR PPRVYHDRQP GAGGAGVESR HPHAGRHPYG 610 620 630 640 650 660 SRPATATSER VDSWRSSSST TTAAFDEQRS GAAGGAGAAG TGVGSATRGP RRYRTPYRGG 670 680 690 700 710 720 RQGRGGFSRQ GPGRPTYRIP RHLLASGEYA NYLPADAAGA DSQSSYVLMG THYFGNVPAA 730 740 750 760 770 780 YIELDANSIK EAIKKQVEYY FSVDNLTGDF FLRRKMDPEG YIPVTLIASF HRVLALTTDV 790 800 810 820 830 840 AVIVNAIKES DKLELFEGYK VRTKTTPTTW PITEVPEVNE GEPKAIGTLE QEQLEQNDGQ 850 860 870 880 890 900 EKLEEQTEAD SPPPILTSAM ATKPLNSIPP PPMPRNPQNL VPKMLQDKQQ SRSSTIAALN 910 920 930 940 950 960 SVNAISALTQ QVEGGAAELA GHLSGLAESV KPKSTSTPDK RNAASAGNGA GSAAALVAEP 970 980 990 1000 1010 1020 EGIWKEVKRR SKTNAIKENA TTPPQQQQPP LSQTLNNNND NVKTNNTSSK SKSSSNNAPS 1030 1040 1050 1060 1070 1080 NASSSATVCV TTNNASSATK ATTKTTTTST ATTTTNNNIK SGNAAYSKTH SKSSSKTAAP 1090 1100 1110 1120 1130 1140 PSAQCHAEKE ELDFQFDEEL MDPLPPGTGR INNFTENFSD DDESDYEFAD RDINKLLIVA 1150 1160 1170 1180 1190 1200 QVGRAPKHEG YDRTADFTSR TKITQDLENI INDGLVNYEE DLWTTTNVVA DYKTVNVISQ 1210 1220 1230 1240 1250 1260 ADFEKLAGGR NKSVLPPQVV PPPPPFEEDL DETLVGDTTL NSTLNNTLKS RRARFYAAPN 1270 1280 1290 1300 1310 1320 SHSIDPRTPR KRKLRHTANP PVEAHVGWLL DTVEHRPRTT SMGSSAGTSP TASSYGSFGS 1330 1340 1350 1360 1370 1380 SVPQSLPVFQ HPSHALLKEN NFTQQAYHKY HSRCLKERRR LGYGQSQEMN TLYRFWSFFL 1390 1400 1410 1420 1430 1440 RENFNKSMYN EFRSLALEDA GNGFRYGLEC LFRFFSYGLE KKFRPNIYQD FQDETIADYE 1450 1460 1470 1480 1490 1500 TGQLYGLEKF WAFLKYYKNG EKLEVQPKLA EYLKSFKNIE DFRVVEPEIN EMLQGVGSLN 1510 1520 1530 1540 1550 1560 PGRQLNRHRS VSESDGTAVI AAGGRRLNTT ITNRSDYVGR LLQQQHQQQQ QQQHHQYQQG 1570 1580 1590 1600 1610 1620 YGGYNQQQNR RRTGSFGSTT VRIRSGSLGN KPQVANRNQG SQHELRRGGS NSGLAPHKRQ 1630 1640 1650 1660 1670 QQQKPKPGAG SQTGSTRATT SAAATATTAA SAATSTAATP AVTVSSGSSS SKK
	Isoform C [UniParc]. Checksum: B90DC1BB792454EF	FASTA	1,403	150,937
	10 20 30 40 50 60 MSAKQSGSPK AGTSPLDKRV LQPKAQQQQQ QTKQTASQNN NAQNTASNKK TQQQQQPQQG 70 80 90 100 110 120 ATTTTQTTTA AAAAATAAAA ATAATTSAAA ATSSAAAVPA ATTETATTTT VDASQADALA 130 140 150 160 170 180 KVVVKDKKKV NQKASDFSNV GDWPTLIGGT SGSGKATSNE PKRNPTKKQQ SAKTAAAVAA 190 200 210 220 230 240 SSNTTSSEVA TESNVAGTTS SSNSNPSSST TTTNTTTNSQ ATTAPVASTS HDAKAQRDAE 250 260 270 280 290 300 PAANSAAGTT GTAAGPALTK KIPKHKWRPL PIDLAKSSRP KPIGGRPNRR FSDDIADQRR 310 320 330 340 350 360 PPRVYHDRQP GAGGAGVESR HPHAGRHPYG SRPATATSER VDSWRSSSST TTAAFDEQRS 370 380 390 400 410 420 GAAGGAGAAG TGVGSATRGP RRYRTPYRGG RQGRGGFSRQ GPGRPTYRIP RHLLASGEYA 430 440 450 460 470 480 NYLPADAAGA DSQSSYVLMG THYFGNVPAA YIELDANSIK EAIKKQVEYY FSVDNLTGDF 490 500 510 520 530 540 FLRRKMDPEG YIPVTLIASF HRVLALTTDV AVIVNAIKES DKLELFEGYK VRTKTTPTTW 550 560 570 580 590 600 PITEVPEVNE GEPKAIGTLE QEQLEQNDGQ EKLEEQTEAD SPPPILTSAM ATKPLNSIPP 610 620 630 640 650 660 PPMPRNPQNL VPKMLQDKQQ SRSSTIAALN SVNAISALTQ QVEGGAAELA GHLSGLAESV 670 680 690 700 710 720 KPKSTSTPDK RNAASAGNGA GSAAALVAEP EGIWKEVKRR SKTNAIKENA TTPPQQQQPP 730 740 750 760 770 780 LSQTLNNNND NVKTNNTSSK SKSSSNNAPS NASSSATVCV TTNNASSATK ATTKTTTTST 790 800 810 820 830 840 ATTTTNNNIK SGNAAYSKTH SKSSSKTAAP PSAQCHAEKE ELDFQFDEEL MDPLPPGTGR 850 860 870 880 890 900 INNFTENFSD DDESDYEFAD RDINKLLIVA QVGRAPKHEG YDRTADFTSR TKITQDLENI 910 920 930 940 950 960 INDGLVNYEE DLWTTTNVVA DYKTVNVISQ ADFEKLAGGR NKSVLPPQVV PPPPPFEEDL 970 980 990 1000 1010 1020 DETLVGDTTL NSTLNNTLKS RRARFYAAPN SHSIDPRTPR KRKLRHTANP PVEAHVGWLL 1030 1040 1050 1060 1070 1080 DTVEHRPRTT SMGSSAGTSP TASSYGSFGS SVPQSLPVFQ HPSHALLKEN NFTQQAYHKY 1090 1100 1110 1120 1130 1140 HSRCLKERRR LGYGQSQEMN TLYRFWSFFL RENFNKSMYN EFRSLALEDA GNGFRYGLEC 1150 1160 1170 1180 1190 1200 LFRFFSYGLE KKFRPNIYQD FQDETIADYE TGQLYGLEKF WAFLKYYKNG EKLEVQPKLA 1210 1220 1230 1240 1250 1260 EYLKSFKNIE DFRVVEPEIN EMLQGVGSLN PGRQLNRHRS VSESDGTAVI AAGGRRLNTT 1270 1280 1290 1300 1310 1320 ITNRSDYVGR LLQQQHQQQQ QQQHHQYQQG YGGYNQQQNR RRTGSFGSTT VRIRSGSLGN 1330 1340 1350 1360 1370 1380 KPQVANRNQG SQHELRRGGS NSGLAPHKRQ QQQKPKPGAG SQTGSTRATT SAAATATTAA 1390 1400 SAATSTAATP AVTVSSGSSS SKK
	Isoform A (B) (E) [UniParc]. Checksum: 83B79ACAF6B9FB66	FASTA	965	106,221
	10 20 30 40 50 60 MGTHYFGNVP AAYIELDANS IKEAIKKQVE YYFSVDNLTG DFFLRRKMDP EGYIPVTLIA 70 80 90 100 110 120 SFHRVLALTT DVAVIVNAIK ESDKLELFEG YKVRTKTTPT TWPITEVPEV NEGEPKAIGT 130 140 150 160 170 180 LEQEQLEQND GQEKLEEQTE ADSPPPILTS AMATKPLNSI PPPPMPRNPQ NLVPKMLQDK 190 200 210 220 230 240 QQSRSSTIAA LNSVNAISAL TQQVEGGAAE LAGHLSGLAE SVKPKSTSTP DKRNAASAGN 250 260 270 280 290 300 GAGSAAALVA EPEGIWKEVK RRSKTNAIKE NATTPPQQQQ PPLSQTLNNN NDNVKTNNTS 310 320 330 340 350 360 SKSKSSSNNA PSNASSSATV CVTTNNASSA TKATTKTTTT STATTTTNNN IKSGNAAYSK 370 380 390 400 410 420 THSKSSSKTA APPSAQCHAE KEELDFQFDE ELMDPLPPGT GRINNFTENF SDDDESDYEF 430 440 450 460 470 480 ADRDINKLLI VAQVGRAPKH EGYDRTADFT SRTKITQDLE NIINDGLVNY EEDLWTTTNV 490 500 510 520 530 540 VADYKTVNVI SQADFEKLAG GRNKSVLPPQ VVPPPPPFEE DLDETLVGDT TLNSTLNNTL 550 560 570 580 590 600 KSRRARFYAA PNSHSIDPRT PRKRKLRHTA NPPVEAHVGW LLDTVEHRPR TTSMGSSAGT 610 620 630 640 650 660 SPTASSYGSF GSSVPQSLPV FQHPSHALLK ENNFTQQAYH KYHSRCLKER RRLGYGQSQE 670 680 690 700 710 720 MNTLYRFWSF FLRENFNKSM YNEFRSLALE DAGNGFRYGL ECLFRFFSYG LEKKFRPNIY 730 740 750 760 770 780 QDFQDETIAD YETGQLYGLE KFWAFLKYYK NGEKLEVQPK LAEYLKSFKN IEDFRVVEPE 790 800 810 820 830 840 INEMLQGVGS LNPGRQLNRH RSVSESDGTA VIAAGGRRLN TTITNRSDYV GRLLQQQHQQ 850 860 870 880 890 900 QQQQQHHQYQ QGYGGYNQQQ NRRRTGSFGS TTVRIRSGSL GNKPQVANRN QGSQHELRRG 910 920 930 940 950 960 GSNSGLAPHK RQQQQKPKPG AGSQTGSTRA TTSAAATATT AASAATSTAA TPAVTVSSGS SSSKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"dlarp, a new candidate Hox target in Drosophila whose orthologue in mouse is expressed at sites of epithelium/mesenchymal interactions." Chauvet S., Maurel-Zaffran C., Miassod R., Jullien N., Pradel J., Aragnol D. Dev. Dyn. 218:401-413(2000) [PubMed: 10878606] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM C), DEVELOPMENTAL STAGE, SUBCELLULAR LOCATION, INITIATION CODON ATA.
[2]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[3]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: GENOME REANNOTATION, ALTERNATIVE SPLICING. Strain: Berkeley.
[4]	"A Drosophila full-length cDNA resource." Stapleton M., Carlson J.W., Brokstein P., Yu C., Champe M., George R.A., Guarin H., Kronmiller B., Pacleb J.M., Park S., Wan K.H., Rubin G.M., Celniker S.E. Genome Biol. 3:RESEARCH0080.1-RESEARCH0080.8(2002) [PubMed: 12537569] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM C), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 952-1673 (ISOFORMS A/C/D). Strain: Berkeley. Tissue: Embryo and Ovary.
[5]	"Green fluorescent protein tagging Drosophila proteins at their native genomic loci with small P elements." Clyne P.J., Brotman J.S., Sweeney S.T., Davis G. Genetics 165:1433-1441(2003) [PubMed: 14668392] [Abstract] Cited for: SUBCELLULAR LOCATION.
[6]	"An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells." Bodenmiller B., Mueller L.N., Pedrioli P.G.A., Pflieger D., Juenger M.A., Eng J.K., Aebersold R., Tao W.A. Mol. Biosyst. 3:275-286(2007) [PubMed: 17372656] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-562 AND SER-851, MASS SPECTROMETRY.
[7]	"Phosphoproteome analysis of Drosophila melanogaster embryos." Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P. J. Proteome Res. 7:1675-1682(2008) [PubMed: 18327897] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-284; SER-608; SER-1119; SER-1124; SER-1261; TYR-1315; SER-1510; SER-1512; SER-1578; SER-1585 AND SER-1610, MASS SPECTROMETRY. Tissue: Embryo.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF221108 mRNA. Translation: AAF35862.1. Sequence problems. AE014297 Genomic DNA. Translation: AAF56783.3. AE014297 Genomic DNA. Translation: AAN14138.5. AE014297 Genomic DNA. Translation: AAN14139.1. AE014297 Genomic DNA. Translation: ACZ95051.1. AY113653 mRNA. Translation: AAM29658.1. Sequence problems. AY118468 mRNA. Translation: AAM49837.1. Different initiation.
RefSeq	NP_001163757.1. NM_001170286.1. NP_524998.1. NM_080259.1. NP_733244.5. NM_170365.2. NP_733245.1. NM_170366.2.
UniGene	Dm.20475.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9VAW5. 1 interaction.
STRING	Q9VAW5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	53567.
KEGG	dme:Dmel_CG42551.
NMPDR	fig|7227.3.peg.15082.
Organism-specific databases
CTD	53567.
FlyBase	FBgn0261618. larp.
Phylogenomic databases
eggNOG	inNOG09230.
InParanoid	Q9VAW5.
OMA	EPEINEM.
PhylomeDB	Q9VAW5.
Gene expression databases
ArrayExpress	Q9VAW5.
Bgee	Q9VAW5.
GermOnline	CG14066. Drosophila melanogaster.
Family and domain databases
InterPro	IPR006607. DM15. IPR006630. Lupus_La_RNA-bd. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF05383. La. 1 hit. [Graphical view]
SMART	SM00684. DM15. 3 hits. SM00715. LA. 1 hit. [Graphical view]
PROSITE	PS50961. HTH_LA. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	841422.

Entry information

Entry name

LARP_DROME

Accession

Primary (citable) accession number: Q9VAW5
Secondary accession number(s): A4V3J4 , E1JJ02, Q8IMM4, Q8MSZ4, Q8MYR3, Q9NHN6

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 16, 2005
Last sequence update:	September 21, 2011
Last modified:	January 25, 2012
This is version 79 of the entry and version 5 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Drosophila annotation project