Q9VAB9 (Q9VAB9_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RT02924p EMBL ACX61612.2

Submitted name:
Ribosomal protein S28a EMBL AAF56992.1

Gene names

Name:	RpS28a EMBL AAF56992.1 FlyBase FBgn0039739
Synonyms:	RpS28a-RA EMBL ACX61612.2
ORF Names:	Dmel_CG15527 EMBL AAF56992.1

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	64 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL AAF56992.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	rRNA export from nucleus Inferred from Biological aspect of Ancestor. Source: RefGenome translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytosolic small ribosomal subunit Inferred from Biological aspect of Ancestor. Source: RefGenome
Molecular function	structural constituent of ribosome Inferred from Biological aspect of Ancestor. Source: RefGenome
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9VAB9 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 784AF2B9D0D1B9C4	FASTA	64	7,323
	10 20 30 40 50 60 MDKPQYARVV EILGRTGSQG QCTQVRVEFL GDQSRQIIRN VKGPVRVGDI LSLLETEREA RRLR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley.
[3]	Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014297 Genomic DNA. Translation: AAF56992.1. BT100071 mRNA. Translation: ACX61612.2.
RefSeq	NP_651764.1. NM_143507.1.
UniGene	Dm.27988.
3D structure databases
HSSP	HSSP built from PDB template 1NE3 based on UniProtKB O26356.
ProteinModelPortal	Q9VAB9.
SMR	Q9VAB9. Positions 5-57.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9VAB9.
Proteomic databases
PRIDE	Q9VAB9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0085601; FBpp0084966; FBgn0039739.
GeneID	43564.
KEGG	dme:Dmel_CG15527.
NMPDR	fig|7227.3.peg.15361.
UCSC	CG15527-RA. d. melanogaster.
Organism-specific databases
CTD	43564.
FlyBase	FBgn0039739. RpS28a.
Phylogenomic databases
eggNOG	inNOG11882.
GeneTree	EMGT00050000016863.
InParanoid	Q9VAB9.
OMA	SEREARC.
OrthoDB	EOG4RXWH2.
PhylomeDB	Q9VAB9.
Gene expression databases
ArrayExpress	Q9VAB9.
Family and domain databases
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR000289. Ribosomal_S28e. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02979.
PANTHER	PTHR10769. Ribosomal_S28e. 1 hit.
Pfam	PF01200. Ribosomal_S28e. 1 hit. [Graphical view]
ProDom	PD005541. Ribosomal_S28e. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00961. RIBOSOMAL_S28E. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	834574.

Entry information

Entry name

Q9VAB9_DROME

Accession

Primary (citable) accession number: Q9VAB9
Secondary accession number(s): C9QPF8

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)