Unreviewed, UniProtKB/TrEMBL Q9VA17 (Q9VA17_DROME)

Names and origin

Protein names

Submitted name:
    Sox100B EMBL AAF57112.2

Gene names

Name:	Sox100B EMBL AAF57112.2
ORF Names:	Dmel_CG15552 EMBL AAF57112.2

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	529 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	male gonad development Inferred from direct assay. Source: FlyBase
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q9VD34	1	EBI-129371,EBI-139404

Sequences

	Sequence		Length	Mass (Da)
	Q9VA17-1 [UniParc]. Last modified October 1, 2002. Version 2. Checksum: FBEA857ADA9D3E5C	FASTA	529	57,069
	10 20 30 40 50 60 MSDSSSSNCS KDRAKPVETL VLANYALKAE QKKAQGQGGR KEDERITTAV MKVLEGYDWN 70 80 90 100 110 120 LVQASAKAPT DRKKEHIKRP MNAFMVWAQA ARRVMSKQYP HLQNSELSKS LGKLWKNLKD 130 140 150 160 170 180 SDKKPFMEFA EKLRMTHKQE HPDYKYQPRR KKARVLPSQQ SGEGGSPGPE MTLSATMGSS 190 200 210 220 230 240 GKPRSSNSNG QRRAGKGNAA ADLGSCASTI SHANVGSNSS DVFSNEAFMK SLNSACAASL 250 260 270 280 290 300 MEQSLIETGL DSPCSTASSM SSLTPPATPY NVAPSNAKAS AANNPSLLLR QLSEPVANAG 310 320 330 340 350 360 DGYGVLLEAG REYVAIGEVN YQGQSAGVQS GAEGGGAGQE MDFLENINGY GGYTGSRVSY 370 380 390 400 410 420 PAYSYPANGG HFATEEQQQQ QALQASEALN YKPAAADIDP KEIDQYFMDQ MLPMTQHHHP 430 440 450 460 470 480 HHTHPLHHPL HHSPPLNSSA SLSSACSSAS SQQPVAEYYE HLGYSPAASS ASQNPNFGPQ 490 500 510 520 QPYANGAASM TPTLGDPAPQ QELQSQQQEQ QHQNPSQHHL WGTYTYVNP

References

[1]

"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.

[2]

"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE014297 Genomic DNA. Translation: AAF57112.2.
RefSeq	NP_651839.1.
UniGene	Dm.3273
3D structure databases
HSSP	HSSP built from PDB template 1GT0 based on UniProtKB P48432.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9VA17. 2 interactions.
Genome annotation databases
Ensembl	FBgn0024288. Drosophila melanogaster. [Contig view]
GeneID	45039.
KEGG	dme:Dmel_CG15552.
NMPDR	fig|7227.3.peg.15544.
Organism-specific databases
FlyBase	FBgn0024288. Sox100B.
Phylogenomic databases
OMA	Q9VA17. FLENING.
Gene expression databases
ArrayExpress	Q9VA17.
Family and domain databases
InterPro	IPR020003. ATPase_F1/V1/A1_a/bsu_AS. IPR000910. HMG_HMG1/HMG2. [Graphical view]
Gene3D	G3DSA:1.10.30.10. HMG-box. 1 hit.
Pfam	PF00505. HMG_box. 1 hit. [Graphical view]
SMART	SM00398. HMG. 1 hit. [Graphical view]
PROSITE	PS00152. ATPASE_ALPHA_BETA. 1 hit. Uncertain. PS50118. HMG_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	837896.

Entry information

Entry name

Q9VA17_DROME

Accession

Primary (citable) accession number: Q9VA17

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	October 1, 2002
Last modified:	June 16, 2009
This is version 56 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)