Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA repair protein Rad23

Gene

Rad23

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-DME-532668. N-glycan trimming in the ER and Calnexin/Calreticulin cycle.
R-DME-5696394. DNA Damage Recognition in GG-NER.
R-DME-5696395. Formation of Incision Complex in GG-NER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA repair protein Rad23Imported
Submitted name:
Rad23, isoform AImported
Submitted name:
Rad23, isoform CImported
Gene namesi
Name:Rad23Imported
Synonyms:rad23Imported
ORF Names:CG1836Imported, Dmel_CG1836Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 4

Organism-specific databases

FlyBaseiFBgn0026777. Rad23.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: FlyBase
  • nucleus Source: FlyBase
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiFBgn0026777.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

MINTiMINT-290357.
STRINGi7227.FBpp0305835.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 78Ubiquitin-likeInterPro annotationAdd BLAST78
Domaini155 – 197UBAInterPro annotationAdd BLAST43
Domaini370 – 410UBAInterPro annotationAdd BLAST41

Phylogenomic databases

eggNOGiKOG0011. Eukaryota.
COG5272. LUCA.
GeneTreeiENSGT00390000012078.
KOiK10839.
OMAiMPCEEAN.
OrthoDBiEOG091G0DVL.

Family and domain databases

Gene3Di1.10.10.540. 1 hit.
InterProiIPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
IPR015360. XPC-bd.
[Graphical view]
PfamiPF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view]
PRINTSiPR01839. RAD23PROTEIN.
SMARTiSM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsiTIGR00601. rad23. 1 hit.
PROSITEiPS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9V3W9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIITIKNLQQ QTFTIEFAPE KTVLELKKKI FEERGPEYVA EKQKLIYAGV
60 70 80 90 100
ILTDDRTVGS YNVDEKKFIV VMLTRDSSSS NRNQLSVKES NKLTSTDDSK
110 120 130 140 150
QSMPCEEANH TNSPSSTNTE DSVLSRETRP LSSDELIGEL AQASLQSRAE
160 170 180 190 200
SNLLMGDEYN QTVLSMVEMG YPREQVERAM AASYNNPERA VEYLINGIPA
210 220 230 240 250
EEGTFYNRLN ESTNPSLIPS GPQPASATSA ERSTESNSDP FEFLRSQPQF
260 270 280 290 300
LQMRSLIYQN PHLLHAVLQQ IGQTNPALLQ LISENQDAFL NMLNQPIDRE
310 320 330 340 350
SESGATVPPV SNARIPSTLD NVDLFSPDLE VATSAQRSAA GTSAAHQSGS
360 370 380 390 400
AADNEDLEQP LGVSTIRLNR QDKDAIERLK ALGFPEALVL QAYFACEKNE
410
EQAANFLLSS SFDD
Length:414
Mass (Da):45,781
Last modified:May 1, 2000 - v1
Checksum:i4C2E494CA116F7AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF132147 mRNA. Translation: AAD33594.1.
AE014135 Genomic DNA. Translation: AAF59352.1.
AE014135 Genomic DNA. Translation: AGB96542.1.
RefSeqiNP_001259052.1. NM_001272123.1.
NP_651918.2. NM_143661.3.
UniGeneiDm.1397.

Genome annotation databases

EnsemblMetazoaiFBtr0089122; FBpp0088191; FBgn0026777.
FBtr0333679; FBpp0305835; FBgn0026777.
GeneIDi43785.
KEGGidme:Dmel_CG1836.
UCSCiCG1836-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF132147 mRNA. Translation: AAD33594.1.
AE014135 Genomic DNA. Translation: AAF59352.1.
AE014135 Genomic DNA. Translation: AGB96542.1.
RefSeqiNP_001259052.1. NM_001272123.1.
NP_651918.2. NM_143661.3.
UniGeneiDm.1397.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-290357.
STRINGi7227.FBpp0305835.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0089122; FBpp0088191; FBgn0026777.
FBtr0333679; FBpp0305835; FBgn0026777.
GeneIDi43785.
KEGGidme:Dmel_CG1836.
UCSCiCG1836-RA. d. melanogaster.

Organism-specific databases

CTDi43785.
FlyBaseiFBgn0026777. Rad23.

Phylogenomic databases

eggNOGiKOG0011. Eukaryota.
COG5272. LUCA.
GeneTreeiENSGT00390000012078.
KOiK10839.
OMAiMPCEEAN.
OrthoDBiEOG091G0DVL.

Enzyme and pathway databases

ReactomeiR-DME-532668. N-glycan trimming in the ER and Calnexin/Calreticulin cycle.
R-DME-5696394. DNA Damage Recognition in GG-NER.
R-DME-5696395. Formation of Incision Complex in GG-NER.

Miscellaneous databases

ChiTaRSiRad23. fly.
GenomeRNAii43785.

Gene expression databases

BgeeiFBgn0026777.

Family and domain databases

Gene3Di1.10.10.540. 1 hit.
InterProiIPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like.
IPR029071. Ubiquitin-rel_dom.
IPR000626. Ubiquitin_dom.
IPR015360. XPC-bd.
[Graphical view]
PfamiPF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view]
PRINTSiPR01839. RAD23PROTEIN.
SMARTiSM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsiTIGR00601. rad23. 1 hit.
PROSITEiPS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9V3W9_DROME
AccessioniPrimary (citable) accession number: Q9V3W9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 142 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.