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Protein
Submitted name:

DNA repair protein Rad23

Gene

Rad23

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DME-532668 N-glycan trimming in the ER and Calnexin/Calreticulin cycle
R-DME-5696394 DNA Damage Recognition in GG-NER
R-DME-5696395 Formation of Incision Complex in GG-NER

Names & Taxonomyi

Protein namesi
Submitted name:
DNA repair protein Rad23Imported
Submitted name:
Rad23, isoform AImported
Submitted name:
Rad23, isoform CImported
Gene namesi
Name:Rad23Imported
Synonyms:DHR23Imported, Dmel\CG1836Imported, RAD23Imported, rad23Imported
ORF Names:CG1836Imported, Dmel_CG1836Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 4

Organism-specific databases

FlyBaseiFBgn0026777 Rad23

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ9V3W9

Expressioni

Gene expression databases

BgeeiFBgn0026777
ExpressionAtlasiQ9V3W9 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ9V3W9, 4 interactors
STRINGi7227.FBpp0305835

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 78Ubiquitin-likeInterPro annotationAdd BLAST78
Domaini155 – 197UBAInterPro annotationAdd BLAST43
Domaini370 – 410UBAInterPro annotationAdd BLAST41

Phylogenomic databases

eggNOGiKOG0011 Eukaryota
COG5272 LUCA
GeneTreeiENSGT00390000012078
KOiK10839
OMAiNFLFDQP
OrthoDBiEOG091G0DVL

Family and domain databases

Gene3Di1.10.10.540, 1 hit
InterProiView protein in InterPro
IPR004806 Rad23
IPR006636 STI1_HS-bd
IPR015940 UBA
IPR009060 UBA-like_sf
IPR029071 Ubiquitin-like_domsf
IPR000626 Ubiquitin_dom
IPR015360 XPC-bd
IPR036353 XPC-bd_sf
PfamiView protein in Pfam
PF00627 UBA, 2 hits
PF00240 ubiquitin, 1 hit
PF09280 XPC-binding, 1 hit
PRINTSiPR01839 RAD23PROTEIN
SMARTiView protein in SMART
SM00727 STI1, 1 hit
SM00165 UBA, 2 hits
SM00213 UBQ, 1 hit
SUPFAMiSSF101238 SSF101238, 1 hit
SSF46934 SSF46934, 2 hits
SSF54236 SSF54236, 1 hit
TIGRFAMsiTIGR00601 rad23, 1 hit
PROSITEiView protein in PROSITE
PS50030 UBA, 2 hits
PS50053 UBIQUITIN_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q9V3W9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIITIKNLQQ QTFTIEFAPE KTVLELKKKI FEERGPEYVA EKQKLIYAGV
60 70 80 90 100
ILTDDRTVGS YNVDEKKFIV VMLTRDSSSS NRNQLSVKES NKLTSTDDSK
110 120 130 140 150
QSMPCEEANH TNSPSSTNTE DSVLSRETRP LSSDELIGEL AQASLQSRAE
160 170 180 190 200
SNLLMGDEYN QTVLSMVEMG YPREQVERAM AASYNNPERA VEYLINGIPA
210 220 230 240 250
EEGTFYNRLN ESTNPSLIPS GPQPASATSA ERSTESNSDP FEFLRSQPQF
260 270 280 290 300
LQMRSLIYQN PHLLHAVLQQ IGQTNPALLQ LISENQDAFL NMLNQPIDRE
310 320 330 340 350
SESGATVPPV SNARIPSTLD NVDLFSPDLE VATSAQRSAA GTSAAHQSGS
360 370 380 390 400
AADNEDLEQP LGVSTIRLNR QDKDAIERLK ALGFPEALVL QAYFACEKNE
410
EQAANFLLSS SFDD
Length:414
Mass (Da):45,781
Last modified:May 1, 2000 - v1
Checksum:i4C2E494CA116F7AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF132147 mRNA Translation: AAD33594.1
AE014135 Genomic DNA Translation: AAF59352.1
AE014135 Genomic DNA Translation: AGB96542.1
RefSeqiNP_001259052.1, NM_001272123.1
NP_651918.2, NM_143661.3
UniGeneiDm.1397

Genome annotation databases

EnsemblMetazoaiFBtr0089122; FBpp0088191; FBgn0026777
FBtr0333679; FBpp0305835; FBgn0026777
GeneIDi43785
KEGGidme:Dmel_CG1836
UCSCiCG1836-RA d. melanogaster

Similar proteinsi

Entry informationi

Entry nameiQ9V3W9_DROME
AccessioniPrimary (citable) accession number: Q9V3W9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 23, 2018
This is version 156 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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