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Protein
Submitted name:

Uncharacterized protein

Gene

PAB2304

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP; via amide nitrogen and carbonyl oxygenCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi41 – 466ADPCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Nucleotide-bindingCombined sources

Enzyme and pathway databases

BRENDAi3.6.1.3. 5242.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Submitted name:
Walker-Type ATPaseImported
Gene namesi
ORF Names:PAB2304Imported
OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB2304.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QENX-ray2.25A1-350[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini15 – 243229ATPase_2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiarCOG03169. Archaea.
COG1672. LUCA.
HOGENOMiHOG000222227.
KOiK06921.
OMAiEVYVEPF.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR011579. ATPase_dom.
IPR027417. P-loop_NTPase.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01637. ATPase_2. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9V2L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLFDLRPKTR REDIFDREEE FRKLEESLEN YPLTLLLGIR RVGKSSLLRA
60 70 80 90 100
FLNERPGILI DCRELYAERG HITREELIKE LQSTISPFQK FQSKFKISLN
110 120 130 140 150
LKFLTLEPRK LSLREVFREL NDLGEELGEF IVAFDEAQYL RFYGSRGGKE
160 170 180 190 200
LLALFAYAYD SLPNLKIILT GSEVGLLHDF LKITDYESPL YGRIAGEVLV
210 220 230 240 250
KPFDKDTSVE FLKRGFREVN LDVPENEIEE AVELLDGIPG WLVVFGVEYL
260 270 280 290 300
RNGDFGRAMK RTLEVAKGLI MGELEELRRR SPRYVDILRA IALGYNRWSL
310 320 330 340 350
IRDYLAVKGT KIPEPRLYAL LENLKKMNWI VEEDNTYKIA DPVVATVLRI
Length:350
Mass (Da):40,704
Last modified:May 1, 2000 - v1
Checksum:iBDF317FF79BAD7F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248283 Genomic DNA. Translation: CAB48985.1.
HE613800 Genomic DNA. Translation: CCE69434.1.
PIRiB75192.
RefSeqiWP_010867186.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB48985; CAB48985; PAB2304.
GeneIDi1494945.
KEGGipab:PAB2304.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248283 Genomic DNA. Translation: CAB48985.1.
HE613800 Genomic DNA. Translation: CCE69434.1.
PIRiB75192.
RefSeqiWP_010867186.1. NC_000868.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2QENX-ray2.25A1-350[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB2304.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB48985; CAB48985; PAB2304.
GeneIDi1494945.
KEGGipab:PAB2304.

Phylogenomic databases

eggNOGiarCOG03169. Archaea.
COG1672. LUCA.
HOGENOMiHOG000222227.
KOiK06921.
OMAiEVYVEPF.

Enzyme and pathway databases

BRENDAi3.6.1.3. 5242.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR011579. ATPase_dom.
IPR027417. P-loop_NTPase.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01637. ATPase_2. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Adrian P.V.
    Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  2. "Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
    Gaspin C., Cavaille J., Erauso G.
    J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  3. "Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
    Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
    Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GE5 / OrsayImported and OrsayImported.
  5. "The walker-type atpase paby2304 of pyrococcus abyssi."
    Uhring M., Bey G., Lecompte O., Moras D., Poch O., Cavarelli J.
    Submitted (JUN-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS) IN COMPLEX WITH ADP.
  6. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
    Gao J., Wang J.
    Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: GE5Imported and GE5 / OrsayImported.

Entry informationi

Entry nameiQ9V2L3_PYRAB
AccessioniPrimary (citable) accession number: Q9V2L3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 11, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.