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Q9V2D8

- Q9V2D8_PYRAB

UniProt

Q9V2D8 - Q9V2D8_PYRAB

Protein
Submitted name:

Pyridoxal phosphate-dependent aminotransferase

Gene

PAB0086

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 80 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal phosphate-dependent aminotransferaseImported
    Gene namesi
    Ordered Locus Names:PAB0086Imported, PYRAB01360Imported
    OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
    Taxonomic identifieri272844 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
    ProteomesiUP000000810: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi272844.PAB0086.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9V2D8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiFYSNAIQ.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 2 hits.
    InterProiIPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9V2D8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MINMTKWDEI KKYTSKKVDE NLKIVELDEE YLPRAIGFKY YPLVIERAKG    50
    SRVWDKDGNE YIDFLTSAAV FNVGHAHPKV VEAIKEQVDK FLNYTIGYLY 100
    TEPPVRLAEL LSEMTPGDFE KKVTFGFSGS DAVDSSIKAS RAYTKKVHII 150
    SFRHSYHGMT YGALSVTGIV DEKVKSIVQP MSNVHIVDYP DPYRNPWNID 200
    GYENPSELAN RALDEVEKKI KELNGDVAGI ILEPIQGDAG VVIPPLEFIK 250
    GLKKLTDEYG MVFIDEEVQT GMGRTGKWWA IEHFEVVPDL LVSAKALGGG 300
    MPISAVVGRA EIMDSVPSPL FVFTHVGHAV NASAAIATIK VIKEEKLVER 350
    AKELGDYALK RFRELQEEYP IIGDVRGKGL MIGVDIVKEG TKDPNRELAQ 400
    KICWRAWEKG LIIITFGKHG NVLRIAPPLT ISKEDFDRGI EIIEEAIKDA 450
    INGKVPDDVI KFLRAW 466
    Length:466
    Mass (Da):52,250
    Last modified:May 1, 2000 - v1
    Checksum:iE57A417C49BA19BD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ248283 Genomic DNA. Translation: CAB49060.1.
    HE613800 Genomic DNA. Translation: CCE69512.1.
    PIRiE75201.
    RefSeqiNP_125829.1. NC_000868.1.

    Genome annotation databases

    EnsemblBacteriaiCAB49060; CAB49060; PAB0086.
    GeneIDi1495023.
    KEGGipab:PAB0086.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ248283 Genomic DNA. Translation: CAB49060.1 .
    HE613800 Genomic DNA. Translation: CCE69512.1 .
    PIRi E75201.
    RefSeqi NP_125829.1. NC_000868.1.

    3D structure databases

    ProteinModelPortali Q9V2D8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272844.PAB0086.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB49060 ; CAB49060 ; PAB0086 .
    GeneIDi 1495023.
    KEGGi pab:PAB0086.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi FYSNAIQ.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 2 hits.
    InterProi IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Genoscope
      Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: OrsayImported.
    2. "Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
      Gaspin C., Cavaille J., Erauso G.
      J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: OrsayImported.
    3. "Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
      Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
      Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: OrsayImported.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GE5 / OrsayImported and OrsayImported.
    5. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
      Gao J., Wang J.
      Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: GE5Imported and GE5 / OrsayImported.

    Entry informationi

    Entry nameiQ9V2D8_PYRAB
    AccessioniPrimary (citable) accession number: Q9V2D8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3