Q9V2D8 (Q9V2D8_PYRAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal phosphate-dependent aminotransferase EMBL CAB49060.1

Gene names

Ordered Locus Names:

PAB0086 EMBL CAB49060.1, PYRAB01360

Organism

Pyrococcus abyssi (strain GE5 / Orsay) [Complete proteome] [HAMAP]

Taxonomic identifier

272844 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus › Pyrococcus abyssi

Protein attributes

Sequence length	466 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL CAB49060.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9V2D8 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: E57A417C49BA19BD	FASTA	466	52,250
	10 20 30 40 50 60 MINMTKWDEI KKYTSKKVDE NLKIVELDEE YLPRAIGFKY YPLVIERAKG SRVWDKDGNE 70 80 90 100 110 120 YIDFLTSAAV FNVGHAHPKV VEAIKEQVDK FLNYTIGYLY TEPPVRLAEL LSEMTPGDFE 130 140 150 160 170 180 KKVTFGFSGS DAVDSSIKAS RAYTKKVHII SFRHSYHGMT YGALSVTGIV DEKVKSIVQP 190 200 210 220 230 240 MSNVHIVDYP DPYRNPWNID GYENPSELAN RALDEVEKKI KELNGDVAGI ILEPIQGDAG 250 260 270 280 290 300 VVIPPLEFIK GLKKLTDEYG MVFIDEEVQT GMGRTGKWWA IEHFEVVPDL LVSAKALGGG 310 320 330 340 350 360 MPISAVVGRA EIMDSVPSPL FVFTHVGHAV NASAAIATIK VIKEEKLVER AKELGDYALK 370 380 390 400 410 420 RFRELQEEYP IIGDVRGKGL MIGVDIVKEG TKDPNRELAQ KICWRAWEKG LIIITFGKHG 430 440 450 460 NVLRIAPPLT ISKEDFDRGI EIIEEAIKDA INGKVPDDVI KFLRAW

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi." Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P. Mol. Microbiol. 47:1495-1512(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GE5 / Orsay.
[2]	Gao J. Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: GE5 EMBL CCE69512.1.
[3]	"Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638." Gao J., Wang J. Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: GE5 / Orsay.
[4]	"Re-annotation of Two Hyperthermophilic Archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638." Gao J., Wang J. Curr. Microbiol. 0:0-0(0) Cited for: NUCLEOTIDE SEQUENCE. Strain: GE5 EMBL CCE69512.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ248283 Genomic DNA. Translation: CAB49060.1. HE613800 Genomic DNA. Translation: CCE69512.1.
PIR	E75201.
RefSeq	NP_125829.1. NC_000868.1.
3D structure databases
HSSP	HSSP built from PDB template 2DKB based on UniProtKB P16932.
ModBase	Search...
Protein-protein interaction databases
STRING	272844.PAB0086.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAB49060; CAB49060; PAB0086.
GeneID	1495023.
KEGG	pab:PAB0086.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K00823.
OMA	NLCAEAN.
ProtClustDB	CLSK304114.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 2 hits.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9V2D8_PYRAB

Accession

Primary (citable) accession number: Q9V2D8

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	May 1, 2013
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)