Q9V1W4 (Q9V1W4_PYRAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
SoxA sarcosine oxidase, subunit alpha EMBL CAB49234.1

Gene names

Name:	soxA EMBL CAB49234.1
Ordered Locus Names:	PYRAB03120
ORF Names:	PAB0212 EMBL CAB49234.1

Organism

Pyrococcus abyssi (strain GE5 / Orsay) [Complete proteome] [HAMAP] EMBL CAB49234.1

Taxonomic identifier

272844 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	481 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9V1W4 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: B152FDD9C4A9CFCC	FASTA	481	52,465
	10 20 30 40 50 60 MDIVRIKEHP ILNFESKRGR KVTIYYKGKP IEAYEGETIA AALHAAGIKV LNYSRIKKRP 70 80 90 100 110 120 RGLFCAIGKC SSCLMTVNGI PNVRTCITLV EDGMRIEENA PRLPKELKEL KKRNVRRVKS 130 140 150 160 170 180 DIIVIGGGPA GMMAAISAHD AGAKVVLIDE NPMLGGQLVK QTHKFFGKRS QFAGVRGVKI 190 200 210 220 230 240 AEILENEVKK RNIEVFLQTS AVGIFQDGNE KIVVGIRKES ELIELHGRAI IVATGAMEKS 250 260 270 280 290 300 VPFENNDLPG IYGAGAIQTL MNTYGVKPGE KALIVGAGNV GLILAYQLIQ AGVKVEAIVE 310 320 330 340 350 360 AMPKIGGYFV HAAKVRRLGV PILTRHTILR AEGKEKVERA IVAQIDENWR PIPGTEKIFD 370 380 390 400 410 420 VDLIAIAVGL RPSIELLQQA GCQIRYVREL GGHVAVRDEW LETTVRGIFV AGDTAGIEEA 430 440 450 460 470 480 TTAMLEGKIA GIAAALRLGI ASESLVKEIE KTERELEEFR SGPFGKHIVE GIRKLLSEVS K

References

[1]

"An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi." Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P. Mol. Microbiol. 47:1495-1512(2003) [PubMed: 12622808] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GE5 / Orsay.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ248284 Genomic DNA. Translation: CAB49234.1.
PIR	C75144.
RefSeq	NP_126003.1. NC_000868.1.
3D structure databases
ProteinModelPortal	Q9V1W4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000003743; EBPYRP00000003674; EBPYRG00000003743.
GeneID	1495202.
GenomeReviews	Gene locus PYRAB03120 in contig AL096836_GR.
KEGG	pab:PAB0212.
NMPDR	fig|272844.1.peg.326.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000022425.
HOGENOM	HBG460563.
OMA	ILTRHTI.
ProtClustDB	CLSK862584.
Enzyme and pathway databases
BioCyc	PABY272844:PAB0212-MONOMER.
Family and domain databases
InterPro	IPR006058. 2Fe2S_fd_BS. IPR012675. Beta-grasp_ferredoxin-type. IPR013027. FAD_pyr_nucl-diS_OxRdtase. IPR001041. Ferredoxin. IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD. IPR001327. Pyr_OxRdtase_NAD-bd_dom. [Graphical view]
Gene3D	G3DSA:3.10.20.30. Ferredoxin_fold. 2 hits.
KO	K00302.
Pfam	PF00070. Pyr_redox. 2 hits. PF07992. Pyr_redox_2. 1 hit. [Graphical view]
PRINTS	PR00368. FADPNR.
SUPFAM	SSF54292. Ferredoxin. 1 hit.
PROSITE	PS00197. 2FE2S_FER_1. 1 hit. PS51085. 2FE2S_FER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9V1W4_PYRAB

Accession

Primary (citable) accession number: Q9V1W4

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	November 16, 2011
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)