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Reviewed, UniProtKB/Swiss-Prot Q9V1U4 (RNP1_PYRAB)

Last modified November 3, 2009. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Ribonuclease P protein component 1
      Short name=RNase P component 1
    EC=3.1.26.5
Gene names
Name: rnp1
Ordered Locus Names: PYRAB03330
ORF Names: PAB2126
OrganismPyrococcus abyssi [Complete proteome] [HAMAP]
Taxonomic identifier29292 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length127 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity.

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. HAMAP MF_00754

Subunit structure

Consists of a catalytic RNA component and at least 4 protein subunits Potential.

Sequence similarities

Belongs to the eukaryotic/archaeal RNase P protein component 1 family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 127127Ribonuclease P protein component 1 HAMAP MF_00754
PRO_0000128435

Sequences

Sequence LengthMass (Da)Tools
Q9V1U4-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6048763F6582C9A0

FASTA12714,970
        10         20         30         40         50         60 
MRRNGKERKD RTSGGSQRPY QEIVGRTWIF RGSHRGRVTK RNIIWHELIG LKVRVVNSMH 

        70         80         90        100        110        120 
PGFVGIEGYV VDETRNMLVI VGDKVWKVPK DVCIFEFETE DGAKIKIPGE RLVGRPEMRL 


KKRWRKW 

« Hide

References

[1]"An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi."
Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P.
Mol. Microbiol. 47:1495-1512(2003) [PubMed: 12622808] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GE5 / Orsay.

Cross-references

Sequence databases

AJ248284 Genomic DNA. Translation: CAB49255.1.
PIRH75146.
RefSeqNP_126024.1.

3D structure databases

SMRQ9V1U4. Positions 36-127.
ModBaseSearch...

Genome annotation databases

GeneID1495223.
GenomeReviewsGene locus PYRAB03330 in contig AL096836_GR.
KEGGpab:PAB2126.
NMPDRfig|272844.1.peg.347.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ9V1U4.
OMAVINETRN.

Enzyme and pathway databases

BioCycPABY272844:PAB2126-MON.
BRENDA3.1.26.5. 262861.

Family and domain databases

HAMAPMF_00754.
[Tree]
InterProIPR002730. RNase_P/MRP_p29-sub_euk/arc.
[Graphical view]
Gene3DG3DSA:2.30.30.210. RNase_P_Rpp29. 1 hit.
PfamPF01868. UPF0086. 1 hit.
[Graphical view]
ProDomPD009163. UPF0086. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00538. POP4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRNP1_PYRAB
AccessionPrimary (citable) accession number: Q9V1U4
Entry history
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: May 1, 2000
Last modified: November 3, 2009
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents