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Q9V1U4

- RNP1_PYRAB

UniProt

Q9V1U4 - RNP1_PYRAB

Protein

Ribonuclease P protein component 1

Gene

rnp1

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
  1. Functioni

    Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

    Catalytic activityi

    Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

    GO - Molecular functioni

    1. ribonuclease P activity Source: UniProtKB-HAMAP
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. mRNA cleavage Source: InterPro
    2. rRNA processing Source: InterPro
    3. tRNA 5'-leader removal Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Endonuclease, Hydrolase, Nuclease

    Keywords - Biological processi

    tRNA processing

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribonuclease P protein component 1UniRule annotation (EC:3.1.26.5UniRule annotation)
    Short name:
    RNase P component 1UniRule annotation
    Alternative name(s):
    Rpp29UniRule annotation
    Gene namesi
    Name:rnp1UniRule annotation
    Ordered Locus Names:PYRAB03330
    ORF Names:PAB2126
    OrganismiPyrococcus abyssi (strain GE5 / Orsay)
    Taxonomic identifieri272844 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
    ProteomesiUP000000810: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. ribonuclease MRP complex Source: InterPro
    3. ribonuclease P complex Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 127127Ribonuclease P protein component 1PRO_0000128435Add
    BLAST

    Interactioni

    Subunit structurei

    Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi272844.PAB2126.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9V1U4.
    SMRiQ9V1U4. Positions 36-127.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the eukaryotic/archaeal RNase P protein component 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1588.
    HOGENOMiHOG000231353.
    KOiK03538.
    OMAiIFEFETE.

    Family and domain databases

    Gene3Di2.30.30.210. 1 hit.
    HAMAPiMF_00754. RNase_P_1.
    InterProiIPR002730. RNase_P/MRP_p29.
    IPR023538. RNase_P_comp-1.
    IPR023534. Rof/RNase_P-like.
    [Graphical view]
    PfamiPF01868. UPF0086. 1 hit.
    [Graphical view]
    SMARTiSM00538. POP4. 1 hit.
    [Graphical view]
    SUPFAMiSSF101744. SSF101744. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9V1U4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRRNGKERKD RTSGGSQRPY QEIVGRTWIF RGSHRGRVTK RNIIWHELIG    50
    LKVRVVNSMH PGFVGIEGYV VDETRNMLVI VGDKVWKVPK DVCIFEFETE 100
    DGAKIKIPGE RLVGRPEMRL KKRWRKW 127
    Length:127
    Mass (Da):14,970
    Last modified:May 1, 2000 - v1
    Checksum:i6048763F6582C9A0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ248284 Genomic DNA. Translation: CAB49255.1.
    HE613800 Genomic DNA. Translation: CCE69710.1.
    PIRiH75146.
    RefSeqiNP_126024.1. NC_000868.1.

    Genome annotation databases

    EnsemblBacteriaiCAB49255; CAB49255; PAB2126.
    GeneIDi1495223.
    KEGGipab:PAB2126.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ248284 Genomic DNA. Translation: CAB49255.1 .
    HE613800 Genomic DNA. Translation: CCE69710.1 .
    PIRi H75146.
    RefSeqi NP_126024.1. NC_000868.1.

    3D structure databases

    ProteinModelPortali Q9V1U4.
    SMRi Q9V1U4. Positions 36-127.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272844.PAB2126.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB49255 ; CAB49255 ; PAB2126 .
    GeneIDi 1495223.
    KEGGi pab:PAB2126.

    Phylogenomic databases

    eggNOGi COG1588.
    HOGENOMi HOG000231353.
    KOi K03538.
    OMAi IFEFETE.

    Family and domain databases

    Gene3Di 2.30.30.210. 1 hit.
    HAMAPi MF_00754. RNase_P_1.
    InterProi IPR002730. RNase_P/MRP_p29.
    IPR023538. RNase_P_comp-1.
    IPR023534. Rof/RNase_P-like.
    [Graphical view ]
    Pfami PF01868. UPF0086. 1 hit.
    [Graphical view ]
    SMARTi SM00538. POP4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101744. SSF101744. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GE5 / Orsay.
    2. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
      Gao J., Wang J.
      Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: GE5 / Orsay.

    Entry informationi

    Entry nameiRNP1_PYRAB
    AccessioniPrimary (citable) accession number: Q9V1U4
    Secondary accession number(s): G8ZHW7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 29, 2004
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3