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Protein

Ribonuclease P protein component 1

Gene

rnp1

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionEndonuclease, Hydrolase, Nuclease
Biological processtRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 1UniRule annotation (EC:3.1.26.5UniRule annotation)
Short name:
RNase P component 1UniRule annotation
Alternative name(s):
Rpp29UniRule annotation
Gene namesi
Name:rnp1UniRule annotation
Ordered Locus Names:PYRAB03330
ORF Names:PAB2126
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001284351 – 127Ribonuclease P protein component 1Add BLAST127

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

Protein-protein interaction databases

STRINGi272844.PAB2126

Structurei

3D structure databases

ProteinModelPortaliQ9V1U4
SMRiQ9V1U4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic/archaeal RNase P protein component 1 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00784 Archaea
COG1588 LUCA
HOGENOMiHOG000231353
KOiK03538
OMAiWHELIGL
OrthoDBiPOG093Z0M9M

Family and domain databases

Gene3Di2.30.30.210, 1 hit
HAMAPiMF_00754 RNase_P_1, 1 hit
InterProiView protein in InterPro
IPR002730 RNase_P/MRP_p29
IPR036980 RNase_P/MRP_p29_sf
IPR023538 RNP1
IPR023534 Rof/RNase_P-like
PfamiView protein in Pfam
PF01868 UPF0086, 1 hit
SMARTiView protein in SMART
SM00538 POP4, 1 hit
SUPFAMiSSF101744 SSF101744, 1 hit

Sequencei

Sequence statusi: Complete.

Q9V1U4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRNGKERKD RTSGGSQRPY QEIVGRTWIF RGSHRGRVTK RNIIWHELIG
60 70 80 90 100
LKVRVVNSMH PGFVGIEGYV VDETRNMLVI VGDKVWKVPK DVCIFEFETE
110 120
DGAKIKIPGE RLVGRPEMRL KKRWRKW
Length:127
Mass (Da):14,970
Last modified:May 1, 2000 - v1
Checksum:i6048763F6582C9A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248284 Genomic DNA Translation: CAB49255.1
HE613800 Genomic DNA Translation: CCE69710.1
PIRiH75146

Genome annotation databases

EnsemblBacteriaiCAB49255; CAB49255; PAB2126
KEGGipab:PAB2126
PATRICifig|272844.11.peg.354

Similar proteinsi

Entry informationi

Entry nameiRNP1_PYRAB
AccessioniPrimary (citable) accession number: Q9V1U4
Secondary accession number(s): G8ZHW7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: May 1, 2000
Last modified: May 23, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health