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Q9V1K4 (Q9V1K4_PYRAB) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Sensory rhodopsin II transducer (HTR-II) (Methyl-accepting phototaxis protein II) (Mpp-II) EMBL CCE69803.1
Gene names
Ordered Locus Names:PAB2066 EMBL CAB49345.1, PYRAB04230 EMBL CAB49345.1
OrganismPyrococcus abyssi (strain GE5 / Orsay) [Complete proteome] [HAMAP] EMBL CAB49345.1
Taxonomic identifier272844 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9V1K4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 60A8DECF1C5932BE

FASTA50155,260
        10         20         30         40         50         60 
MKFGKKLVIS IFTPLILVVL TAIIIQNIAI SDLYDNLEKT MKVVQTGGSV EAIRETLENA 

        70         80         90        100        110        120 
KSQLKETLWL SIGVMSIVAV ISGALGMRLM NSTMRPINEM AKIAESIAEG KLSRAREMVS 

       130        140        150        160        170        180 
KIQYREDDEI GKLIEGFRAI SQDVLQTLEI ITERMEKISE GDVSDDLKVH AKGDFESILN 

       190        200        210        220        230        240 
SMRKTISNLR ELMKTVRDLA LTLESRANDL TRISSEISEA INQVAEAIQQ VSVEAQRQQE 

       250        260        270        280        290        300 
NITEIMEGMN ITADVTQRTV DAMEEFSGVV NEVLSIAREG KDKGEKAISQ VEDIQDAMKV 

       310        320        330        340        350        360 
IRQAVQEVAE MSKNVGDIIN AIADIAEQTN LLALNAAIEA ARAGELGRGF AVVAQEVRNL 

       370        380        390        400        410        420 
AEESKEAAEK IRGILNEIQE KVEKAVEETE KGVKVVDDSV DFLKETVGYL MNIGELLDDV 

       430        440        450        460        470        480 
ESKLQDIKNE LANTQEHVEN AKKALENLAA SAQETTASAE EVSASAQEQA SSMEEVKRNI 

       490        500 
IELRDIVKKL REAVEFIKVE G 

« Hide

References

« Hide 'large scale' references
[1]Genoscope
Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Orsay EMBL CAB49345.1.
[2]"Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
Gaspin C., Cavaille J., Erauso G.
J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Orsay EMBL CAB49345.1.
[3]"Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Orsay EMBL CAB49345.1.
[4]"An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi."
Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P.
Mol. Microbiol. 47:1495-1512(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GE5 / Orsay and Orsay EMBL CAB49345.1.
[5]"Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
Gao J., Wang J.
Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: GE5 EMBL CCE69803.1 and GE5 / Orsay.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ248284 Genomic DNA. Translation: CAB49345.1.
HE613800 Genomic DNA. Translation: CCE69803.1.
PIRB75158.
RefSeqNP_126114.1. NC_000868.1.

3D structure databases

ProteinModelPortalQ9V1K4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272844.PAB2066.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB49345; CAB49345; PAB2066.
GeneID1495316.
KEGGpab:PAB2066.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000114899.
OMAQEHVENA.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9V1K4_PYRAB
AccessionPrimary (citable) accession number: Q9V1K4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)