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Protein
Submitted name:

Methyl-accepting chemotaxis protein

Gene

PAB2066

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis proteinImported
Submitted name:
Sensory rhodopsin II transducer (HTR-II) (Methyl-accepting phototaxis protein II) (Mpp-II)Imported
Gene namesi
Ordered Locus Names:PAB2066Imported
OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 3024HelicalSequence analysisAdd
BLAST
Transmembranei68 – 9023HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB2066.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini91 – 14959HAMPInterPro annotationAdd
BLAST
Domaini213 – 463251Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili210 – 24132Sequence analysisAdd
BLAST
Coiled coili357 – 38832Sequence analysisAdd
BLAST
Coiled coili410 – 46253Sequence analysisAdd
BLAST
Coiled coili473 – 50028Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000114899.
OMAiWICIGIT.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9V1K4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFGKKLVIS IFTPLILVVL TAIIIQNIAI SDLYDNLEKT MKVVQTGGSV
60 70 80 90 100
EAIRETLENA KSQLKETLWL SIGVMSIVAV ISGALGMRLM NSTMRPINEM
110 120 130 140 150
AKIAESIAEG KLSRAREMVS KIQYREDDEI GKLIEGFRAI SQDVLQTLEI
160 170 180 190 200
ITERMEKISE GDVSDDLKVH AKGDFESILN SMRKTISNLR ELMKTVRDLA
210 220 230 240 250
LTLESRANDL TRISSEISEA INQVAEAIQQ VSVEAQRQQE NITEIMEGMN
260 270 280 290 300
ITADVTQRTV DAMEEFSGVV NEVLSIAREG KDKGEKAISQ VEDIQDAMKV
310 320 330 340 350
IRQAVQEVAE MSKNVGDIIN AIADIAEQTN LLALNAAIEA ARAGELGRGF
360 370 380 390 400
AVVAQEVRNL AEESKEAAEK IRGILNEIQE KVEKAVEETE KGVKVVDDSV
410 420 430 440 450
DFLKETVGYL MNIGELLDDV ESKLQDIKNE LANTQEHVEN AKKALENLAA
460 470 480 490 500
SAQETTASAE EVSASAQEQA SSMEEVKRNI IELRDIVKKL REAVEFIKVE

G
Length:501
Mass (Da):55,260
Last modified:May 1, 2000 - v1
Checksum:i60A8DECF1C5932BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248284 Genomic DNA. Translation: CAB49345.1.
HE613800 Genomic DNA. Translation: CCE69803.1.
PIRiB75158.
RefSeqiWP_010867545.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB49345; CAB49345; PAB2066.
GeneIDi1495316.
KEGGipab:PAB2066.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248284 Genomic DNA. Translation: CAB49345.1.
HE613800 Genomic DNA. Translation: CCE69803.1.
PIRiB75158.
RefSeqiWP_010867545.1. NC_000868.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB2066.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB49345; CAB49345; PAB2066.
GeneIDi1495316.
KEGGipab:PAB2066.

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000114899.
OMAiWICIGIT.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9V1K4_PYRAB
AccessioniPrimary (citable) accession number: Q9V1K4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: March 16, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.