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Q9V0Q7

- Q9V0Q7_PYRAB

UniProt

Q9V0Q7 - Q9V0Q7_PYRAB

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 85 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported
    Submitted name:
    Pyridoxal phosphate-dependent aminotransferaseImported
    Gene namesi
    Name:gabTImported
    Ordered Locus Names:PYRAB07320Imported
    ORF Names:PAB0501Imported
    OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
    Taxonomic identifieri272844 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
    ProteomesiUP000000810: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi272844.PAB0501.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9V0Q7.
    SMRiQ9V0Q7. Positions 15-445.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiMCGFYAE.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9V0Q7-1 [UniParc]FASTAAdd to Basket

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    MELKPNVKEI PGPKARKVIE EHHKYMATTT NDPNEYFLVI EKAEGVYWID    50
    VDGNVILDFS SGIGVMNVGL RNPKVIEAIK KQLDLVLHAA GTDYYNPYQV 100
    ELAKKLIEIA PGDMERKVFL SNSGTEANEA ALKIAKWSTN RKMFIAFIGA 150
    FHGRTHGTMS LTASKPVHRS RMFPTMPGVE HVPYPNPYRN PWGIDGYENP 200
    DELINRVIEY IEDYLFEHYV PAEEVAGIFF EPIQGEGGYV VPPKNFFKEL 250
    KKLADKHGIL LIDDEVQMGM GRTGRMWAIE HFDVVPDIIT VAKALGGGIP 300
    IGATIFRADL DFGVSGVHSN TFGGNAVAAA AALAVIEELQ NGLIENAQKL 350
    EPLFRERLEE MKEKYEIIGD VRGLGLAWGV EFVKDRKTKE YATKERNEIV 400
    VEALKRGLAL LGCGKSAIRL IPPLIISEEE AKIGLDIFEE AIKVVSERHG 450
    YKIH 454
    Length:454
    Mass (Da):50,667
    Last modified:May 1, 2000 - v1
    Checksum:iA1B435EF65185898
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ248285 Genomic DNA. Translation: CAB49646.1.
    HE613800 Genomic DNA. Translation: CCE70128.1.
    PIRiE75116.
    RefSeqiNP_126415.1. NC_000868.1.

    Genome annotation databases

    EnsemblBacteriaiCAB49646; CAB49646; PAB0501.
    GeneIDi1495641.
    KEGGipab:PAB0501.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ248285 Genomic DNA. Translation: CAB49646.1 .
    HE613800 Genomic DNA. Translation: CCE70128.1 .
    PIRi E75116.
    RefSeqi NP_126415.1. NC_000868.1.

    3D structure databases

    ProteinModelPortali Q9V0Q7.
    SMRi Q9V0Q7. Positions 15-445.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272844.PAB0501.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB49646 ; CAB49646 ; PAB0501 .
    GeneIDi 1495641.
    KEGGi pab:PAB0501.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi MCGFYAE.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Genoscope
      Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: OrsayImported.
    2. "Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
      Gaspin C., Cavaille J., Erauso G.
      J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: OrsayImported.
    3. "Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
      Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
      Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: OrsayImported.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GE5 / OrsayImported and OrsayImported.
    5. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
      Gao J., Wang J.
      Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: GE5Imported and GE5 / OrsayImported.

    Entry informationi

    Entry nameiQ9V0Q7_PYRAB
    AccessioniPrimary (citable) accession number: Q9V0Q7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 85 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3