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Protein

30S ribosomal protein S19e

Gene

rps19e

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May be involved in maturation of the 30S ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S19e
Gene namesi
Name:rps19e
Ordered Locus Names:PYRAB08210
ORF Names:PAB1813
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004189861 – 15030S ribosomal protein S19eAdd BLAST150

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.By similarity

Protein-protein interaction databases

STRINGi272844.PAB1813.

Structurei

Secondary structure

1150
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi4 – 6Combined sources3
Helixi9 – 20Combined sources12
Helixi32 – 34Combined sources3
Helixi45 – 48Combined sources4
Helixi50 – 65Combined sources16
Helixi70 – 77Combined sources8
Helixi93 – 107Combined sources15
Beta strandi110 – 114Combined sources5
Turni115 – 117Combined sources3
Beta strandi118 – 121Combined sources4
Helixi123 – 146Combined sources24

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2V7FX-ray1.15A1-150[»]
ProteinModelPortaliQ9V0G8.
SMRiQ9V0G8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9V0G8.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S19e family.Curated

Phylogenomic databases

eggNOGiarCOG01344. Archaea.
COG2238. LUCA.
HOGENOMiHOG000230649.
KOiK02966.
OMAiKTGRHKE.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_01474. Ribosomal_S19e. 1 hit.
InterProiIPR001266. Ribosomal_S19e.
IPR027548. Ribosomal_S19e_archaeal.
IPR018277. Ribosomal_S19e_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR11710. PTHR11710. 1 hit.
PfamiPF01090. Ribosomal_S19e. 1 hit.
[Graphical view]
ProDomiPD003854. Ribosomal_S19e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM01413. Ribosomal_S19e. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00628. RIBOSOMAL_S19E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9V0G8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVYDVPGD LLVERVAQRL KEIPEIKPPE WAPFVKTGRH KERLPEQEDW
60 70 80 90 100
WYYRVASILR RVYLDGPVGI ERLRTYYGGR KNRGHAPERF YKAGGSIIRK
110 120 130 140 150
ALQQLEAAGF VEKVPGKGRV ITPKGRSFLD KIATELKKEL EEIIPELKKY
Length:150
Mass (Da):17,390
Last modified:May 1, 2000 - v1
Checksum:i5E1AA625D44117FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248285 Genomic DNA. Translation: CAB49735.1.
HE613800 Genomic DNA. Translation: CCE70223.1.
PIRiF75127.
RefSeqiWP_010867943.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB49735; CAB49735; PAB1813.
GeneIDi1496167.
KEGGipab:PAB1813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248285 Genomic DNA. Translation: CAB49735.1.
HE613800 Genomic DNA. Translation: CCE70223.1.
PIRiF75127.
RefSeqiWP_010867943.1. NC_000868.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2V7FX-ray1.15A1-150[»]
ProteinModelPortaliQ9V0G8.
SMRiQ9V0G8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB1813.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB49735; CAB49735; PAB1813.
GeneIDi1496167.
KEGGipab:PAB1813.

Phylogenomic databases

eggNOGiarCOG01344. Archaea.
COG2238. LUCA.
HOGENOMiHOG000230649.
KOiK02966.
OMAiKTGRHKE.

Miscellaneous databases

EvolutionaryTraceiQ9V0G8.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_01474. Ribosomal_S19e. 1 hit.
InterProiIPR001266. Ribosomal_S19e.
IPR027548. Ribosomal_S19e_archaeal.
IPR018277. Ribosomal_S19e_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR11710. PTHR11710. 1 hit.
PfamiPF01090. Ribosomal_S19e. 1 hit.
[Graphical view]
ProDomiPD003854. Ribosomal_S19e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM01413. Ribosomal_S19e. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00628. RIBOSOMAL_S19E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS19E_PYRAB
AccessioniPrimary (citable) accession number: Q9V0G8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2012
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.