Q9V0D6 (Q9V0D6_PYRAB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NAD-dependent malate oxidoreductase (Malic enzyme) (EC 1.1.1.38) EMBL CAB49768.1

Gene names

Ordered Locus Names:	PYRAB08540
ORF Names:	PAB1792 EMBL CAB49768.1

Organism

Pyrococcus abyssi (strain GE5 / Orsay) [Complete proteome] [HAMAP] EMBL CAB49768.1

Taxonomic identifier

272844 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	422 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	malate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro malate dehydrogenase (oxaloacetate-decarboxylating) activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9V0D6 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: C3DE05BF9EB7F52B	FASTA	422	45,504
	10 20 30 40 50 60 MDPLKFHKGG KIGVISKVPL KTREHLSLAY TPGVAEPCKA IAKDPEKVYE YTSKGNSVAV 70 80 90 100 110 120 VSDGSRILGL GNIGPLAGLP VMEGKALLFK RFGGIDAFPI MIGEQDPDKF IEVVKAISPT 130 140 150 160 170 180 FGGINLEDIA SPKCFYILDK LREELDIPVF HDDQQGTAAV VLAGLINALE VVGKRLDEIS 190 200 210 220 230 240 VALFGAGAAG FATLRILVKA GVKPGNVRVV ELVNGKPMVL TKDLDLEKLF PYRGWLLEKT 250 260 270 280 290 300 NDEGIEGGPE EALKGADVLI SFTRPGPGVI KPEWIREMSD DPIVFPLANP VPEILPDEAK 310 320 330 340 350 360 KAGARIVATG RSDYPNQINN LLGFPGIFRG ALDVRARSIT DDMIIEAAKA IASVVEEPSE 370 380 390 400 410 420 ENIIPSPFNP IVYAKEARAV AEEAMKEGVA RVKVKGEEIE ERTLKLISLW DDILGEVADK LS

References

[1]

"An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi." Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P. Mol. Microbiol. 47:1495-1512(2003) [PubMed: 12622808] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GE5 / Orsay.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ248285 Genomic DNA. Translation: CAB49768.1.
PIR	G75131.
RefSeq	NP_126537.1. NC_000868.1.
3D structure databases
HSSP	HSSP built from PDB template 1GZ3 based on UniProtKB P23368.
ProteinModelPortal	Q9V0D6.
SMR	Q9V0D6. Positions 4-420.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000003307; EBPYRP00000003238; EBPYRG00000003307.
GeneID	1496203.
GenomeReviews	Gene locus PYRAB08540 in contig AL096836_GR.
KEGG	pab:PAB1792.
NMPDR	fig|272844.1.peg.896.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000022899.
HOGENOM	HBG285702.
OMA	LDIPVWH.
PhylomeDB	Q9V0D6.
ProtClustDB	CLSK306482.
Enzyme and pathway databases
BioCyc	PABY272844:PAB1792-MONOMER.
Family and domain databases
InterPro	IPR015884. Malic_enzyme_CS. IPR012301. Malic_N. IPR012302. Malic_NAD-bd. IPR001891. Malic_OxRdtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.10380. G3DSA:3.40.50.10380. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00027.
Pfam	PF00390. malic. 2 hits. PF03949. Malic_M. 1 hit. [Graphical view]
PIRSF	PIRSF000106. ME. 1 hit.
SMART	SM00919. Malic_M. 1 hit. [Graphical view]
PROSITE	PS00331. MALIC_ENZYMES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9V0D6_PYRAB

Accession

Primary (citable) accession number: Q9V0D6

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)