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Protein

UPF0201 protein PYRAB09730

Gene

PYRAB09730

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0201 protein PYRAB09730UniRule annotation
Gene namesi
Ordered Locus Names:PYRAB09730
ORF Names:PAB0654
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000945131 – 138UPF0201 protein PYRAB09730Add BLAST138

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB0654.

Structurei

3D structure databases

ProteinModelPortaliQ9V025.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0201 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01043. Archaea.
COG1931. LUCA.
HOGENOMiHOG000224697.
KOiK09736.
OMAiEVEAYVY.

Family and domain databases

Gene3Di3.30.1440.10. 1 hit.
HAMAPiMF_01112. UPF0201. 1 hit.
InterProiIPR022803. Ribosomal_L5_domain.
IPR002739. UPF0201.
[Graphical view]
PfamiPF01877. RNA_binding. 1 hit.
[Graphical view]
SUPFAMiSSF55282. SSF55282. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9V025-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMAMFEEVEV EAYVYPTEDI NKVKKAMLNL VPGLKFEAFD KGEYMILVGK
60 70 80 90 100
TRDKRALQRL YELFRGQQIL DTARMMLEEG YFGEEIIIKV HKQVAYAGKV
110 120 130
NFNEESPLGP ITITIRTKEP QKLMKWLAPR TKDGVPIE
Length:138
Mass (Da):15,988
Last modified:May 1, 2000 - v1
Checksum:i1B55FBCA441E08B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248286 Genomic DNA. Translation: CAB49881.1.
HE613800 Genomic DNA. Translation: CCE70379.1.
PIRiD75072.

Genome annotation databases

EnsemblBacteriaiCAB49881; CAB49881; PAB0654.
KEGGipab:PAB0654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248286 Genomic DNA. Translation: CAB49881.1.
HE613800 Genomic DNA. Translation: CCE70379.1.
PIRiD75072.

3D structure databases

ProteinModelPortaliQ9V025.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB0654.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB49881; CAB49881; PAB0654.
KEGGipab:PAB0654.

Phylogenomic databases

eggNOGiarCOG01043. Archaea.
COG1931. LUCA.
HOGENOMiHOG000224697.
KOiK09736.
OMAiEVEAYVY.

Family and domain databases

Gene3Di3.30.1440.10. 1 hit.
HAMAPiMF_01112. UPF0201. 1 hit.
InterProiIPR022803. Ribosomal_L5_domain.
IPR002739. UPF0201.
[Graphical view]
PfamiPF01877. RNA_binding. 1 hit.
[Graphical view]
SUPFAMiSSF55282. SSF55282. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY973_PYRAB
AccessioniPrimary (citable) accession number: Q9V025
Secondary accession number(s): G8ZID8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.