Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q9UZ71 (Q9UZ71_PYRAB) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 83. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

Pyridoxal phosphate-dependent aminotransferase EMBL CAB50188.1
Gene names
Ordered Locus Names:PAB2386 EMBL CAB50188.1, PYRAB12830 EMBL CAB50188.1
OrganismPyrococcus abyssi (strain GE5 / Orsay) [Complete proteome] [HAMAP] EMBL CAB50188.1
Taxonomic identifier272844 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q9UZ71 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 31DB07EB09DBC616

FASTA45750,328
        10         20         30         40         50         60 
MDYPRIVVNP PGPKAKELIE REKRVLSTGI GVKLFPLVPK RGFGPFIEDV DGNVFIDFLA 

        70         80         90        100        110        120 
GAAAASTGYS HPKLVKAVKE QVELIQHSMI GYTHSERAIR VAEKLVKISP IKNSKVLFGL 

       130        140        150        160        170        180 
SGSDAVDMAI KVSKFSTRRP WILAFIGAYH GQTLGATSVA SFQVSQKRGY SPLMPNVFWV 

       190        200        210        220        230        240 
PYPNPYRNPW GINGYEEPQE LVNRVVEYLE DYVFSHVVPP DEVAAFFAEP IQGDAGIVVP 

       250        260        270        280        290        300 
PENFFKELKK LLDEHGILLV MDEVQTGIGR TGKWFASEWF EVKPDMIIFG KGVASGMGLS 

       310        320        330        340        350        360 
GVIGREDIMD ITSGSALLTP AANPVISAAA DATLEIIEEE NLLKNAIEVG SFIMKRLNEL 

       370        380        390        400        410        420 
KEQFDIIGDV RGKGLMIGVE IVKENGRPDP EMTGKICWRA FELGLILPSY GMFGNVIRIT 

       430        440        450 
PPLVLTKEVA EKGLEIIEKA IKDAIAGKVE RKVVTWH 

« Hide

References

« Hide 'large scale' references
[1]Genoscope
Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Orsay EMBL CAB50188.1.
[2]"Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
Gaspin C., Cavaille J., Erauso G.
J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Orsay EMBL CAB50188.1.
[3]"Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Orsay EMBL CAB50188.1.
[4]"An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi."
Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P.
Mol. Microbiol. 47:1495-1512(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GE5 / Orsay and Orsay EMBL CAB50188.1.
[5]"Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
Gao J., Wang J.
Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: GE5 EMBL CCE70722.1 and GE5 / Orsay.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ248287 Genomic DNA. Translation: CAB50188.1.
HE613800 Genomic DNA. Translation: CCE70722.1.
PIRG75036.
RefSeqNP_126958.1. NC_000868.1.

3D structure databases

ProteinModelPortalQ9UZ71.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272844.PAB2386.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB50188; CAB50188; PAB2386.
GeneID1496668.
KEGGpab:PAB2386.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK00823.
OMARPWILAF.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9UZ71_PYRAB
AccessionPrimary (citable) accession number: Q9UZ71
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)