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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

PAB2386

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Submitted name:
Pyridoxal phosphate-dependent aminotransferaseImported
Gene namesi
Ordered Locus Names:PAB2386Imported, PYRAB12830Imported
OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000000810: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB2386.

Structurei

3D structure databases

ProteinModelPortaliQ9UZ71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiTGYSHPK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UZ71-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDYPRIVVNP PGPKAKELIE REKRVLSTGI GVKLFPLVPK RGFGPFIEDV
60 70 80 90 100
DGNVFIDFLA GAAAASTGYS HPKLVKAVKE QVELIQHSMI GYTHSERAIR
110 120 130 140 150
VAEKLVKISP IKNSKVLFGL SGSDAVDMAI KVSKFSTRRP WILAFIGAYH
160 170 180 190 200
GQTLGATSVA SFQVSQKRGY SPLMPNVFWV PYPNPYRNPW GINGYEEPQE
210 220 230 240 250
LVNRVVEYLE DYVFSHVVPP DEVAAFFAEP IQGDAGIVVP PENFFKELKK
260 270 280 290 300
LLDEHGILLV MDEVQTGIGR TGKWFASEWF EVKPDMIIFG KGVASGMGLS
310 320 330 340 350
GVIGREDIMD ITSGSALLTP AANPVISAAA DATLEIIEEE NLLKNAIEVG
360 370 380 390 400
SFIMKRLNEL KEQFDIIGDV RGKGLMIGVE IVKENGRPDP EMTGKICWRA
410 420 430 440 450
FELGLILPSY GMFGNVIRIT PPLVLTKEVA EKGLEIIEKA IKDAIAGKVE

RKVVTWH
Length:457
Mass (Da):50,328
Last modified:May 1, 2000 - v1
Checksum:i31DB07EB09DBC616
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248287 Genomic DNA. Translation: CAB50188.1.
HE613800 Genomic DNA. Translation: CCE70722.1.
PIRiG75036.
RefSeqiNP_126958.1. NC_000868.1.
WP_010868396.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50188; CAB50188; PAB2386.
GeneIDi1496668.
KEGGipab:PAB2386.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248287 Genomic DNA. Translation: CAB50188.1.
HE613800 Genomic DNA. Translation: CCE70722.1.
PIRiG75036.
RefSeqiNP_126958.1. NC_000868.1.
WP_010868396.1. NC_000868.1.

3D structure databases

ProteinModelPortaliQ9UZ71.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB2386.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB50188; CAB50188; PAB2386.
GeneIDi1496668.
KEGGipab:PAB2386.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiTGYSHPK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Genoscope
    Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  2. "Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
    Gaspin C., Cavaille J., Erauso G.
    J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  3. "Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
    Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
    Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GE5 / OrsayImported and OrsayImported.
  5. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
    Gao J., Wang J.
    Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: GE5Imported and GE5 / OrsayImported.

Entry informationi

Entry nameiQ9UZ71_PYRAB
AccessioniPrimary (citable) accession number: Q9UZ71
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: February 4, 2015
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.