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Protein

50S ribosomal protein L39e

Gene

rpl39e

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L39e
Gene namesi
Name:rpl39e
Ordered Locus Names:PYRAB15190
ORF Names:PAB3384
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001270561 – 5150S ribosomal protein L39eAdd BLAST51

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB3384.

Structurei

3D structure databases

ProteinModelPortaliQ9UYI8.
SMRiQ9UYI8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04177. Archaea.
COG2167. LUCA.
HOGENOMiHOG000230627.
KOiK02924.
OMAiMTHPKRR.
OrthoDBiPOG093Z0N59.

Family and domain databases

Gene3Di1.10.1620.10. 1 hit.
HAMAPiMF_00629. Ribosomal_L39e. 1 hit.
InterProiView protein in InterPro
IPR000077. Ribosomal_L39.
IPR020083. Ribosomal_L39_CS.
IPR023626. Ribosomal_L39e_dom.
PANTHERiPTHR19970. PTHR19970. 1 hit.
PfamiView protein in Pfam
PF00832. Ribosomal_L39. 1 hit.
SUPFAMiSSF48662. SSF48662. 1 hit.
PROSITEiView protein in PROSITE
PS00051. RIBOSOMAL_L39E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UYI8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARNKPLAKK LRLAKAMKQN RRVPVWVIVK TNRRVLTHPK RRHWRRTKLK

E
Length:51
Mass (Da):6,296
Last modified:May 1, 2000 - v1
Checksum:i4662B33EAAD553F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248287 Genomic DNA. Translation: CAB50424.1.
HE613800 Genomic DNA. Translation: CCE70973.1.
PIRiC75066.
RefSeqiWP_010868637.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50424; CAB50424; PAB3384.
GeneIDi1495802.
KEGGipab:PAB3384.
PATRICifig|272844.11.peg.1618.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL39_PYRAB
AccessioniPrimary (citable) accession number: Q9UYI8
Secondary accession number(s): G8ZIU0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: May 1, 2000
Last modified: June 7, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families