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Q9UYI6

- IF6_PYRAB

UniProt

Q9UYI6 - IF6_PYRAB

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Protein

Translation initiation factor 6

Gene

eif6

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.UniRule annotation

GO - Molecular functioni

  1. ribosome binding Source: InterPro
  2. translation initiation factor activity Source: UniProtKB-KW

GO - Biological processi

  1. mature ribosome assembly Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor 6UniRule annotation
Short name:
aIF-6UniRule annotation
Gene namesi
Name:eif6UniRule annotation
Ordered Locus Names:PYRAB15210
ORF Names:PAB1005
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000000810: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 227227Translation initiation factor 6PRO_0000153753Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB1005.

Structurei

3D structure databases

ProteinModelPortaliQ9UYI6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eIF-6 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1976.
HOGENOMiHOG000230604.
KOiK03264.
OMAiNDWCAFT.

Family and domain databases

HAMAPiMF_00032. eIF_6.
InterProiIPR002769. eIF6.
[Graphical view]
PANTHERiPTHR10784. PTHR10784. 1 hit.
PfamiPF01912. eIF-6. 1 hit.
[Graphical view]
PIRSFiPIRSF006413. IF-6. 1 hit.
SMARTiSM00654. eIF6. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00323. eIF-6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UYI6 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MHIERLDFEN SPYLGVFGVA TDRVVLVREG LQEKKLEVIR EVLKVPVIEA
60 70 80 90 100
SIMKSRIIGT LATGNSNAIL VPWYVWDTEI ERIKSAFKEY GIETEIVPFR
110 120 130 140 150
TKYTALGNLI LTNDKAALVS AKFSRDEAKE IGDILGVEVE RGLIAGLHAV
160 170 180 190 200
GSAGVVTNKG GLVHPEASDE ELEWLSELFK VDVYVGTANM GVPYVGTCML
210 220
ANSNGVVVGH LTTGPEIVKI EEALGLI
Length:227
Mass (Da):24,693
Last modified:May 1, 2000 - v1
Checksum:i1C8F1D8C960F54FE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ248287 Genomic DNA. Translation: CAB50426.1.
HE613800 Genomic DNA. Translation: CCE70975.1.
PIRiE75066.
RefSeqiNP_127196.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50426; CAB50426; PAB1005.
GeneIDi1495804.
KEGGipab:PAB1005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ248287 Genomic DNA. Translation: CAB50426.1 .
HE613800 Genomic DNA. Translation: CCE70975.1 .
PIRi E75066.
RefSeqi NP_127196.1. NC_000868.1.

3D structure databases

ProteinModelPortali Q9UYI6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272844.PAB1005.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB50426 ; CAB50426 ; PAB1005 .
GeneIDi 1495804.
KEGGi pab:PAB1005.

Phylogenomic databases

eggNOGi COG1976.
HOGENOMi HOG000230604.
KOi K03264.
OMAi NDWCAFT.

Family and domain databases

HAMAPi MF_00032. eIF_6.
InterProi IPR002769. eIF6.
[Graphical view ]
PANTHERi PTHR10784. PTHR10784. 1 hit.
Pfami PF01912. eIF-6. 1 hit.
[Graphical view ]
PIRSFi PIRSF006413. IF-6. 1 hit.
SMARTi SM00654. eIF6. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00323. eIF-6. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GE5 / Orsay.
  2. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
    Gao J., Wang J.
    Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: GE5 / Orsay.

Entry informationi

Entry nameiIF6_PYRAB
AccessioniPrimary (citable) accession number: Q9UYI6
Secondary accession number(s): G8ZIU2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 21, 2001
Last sequence update: May 1, 2000
Last modified: October 1, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3