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Q9UYI6

- IF6_PYRAB

UniProt

Q9UYI6 - IF6_PYRAB

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Protein

Translation initiation factor 6

Gene
eif6, PYRAB15210, PAB1005
Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex By similarity.UniRule annotation

GO - Molecular functioni

  1. ribosome binding Source: InterPro
  2. translation initiation factor activity Source: UniProtKB-KW

GO - Biological processi

  1. mature ribosome assembly Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor 6
Short name:
aIF-6
Gene namesi
Name:eif6
Ordered Locus Names:PYRAB15210
ORF Names:PAB1005
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000000810: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 227227Translation initiation factor 6UniRule annotationPRO_0000153753Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB1005.

Structurei

3D structure databases

ProteinModelPortaliQ9UYI6.

Family & Domainsi

Sequence similaritiesi

Belongs to the eIF-6 family.

Phylogenomic databases

eggNOGiCOG1976.
HOGENOMiHOG000230604.
KOiK03264.
OMAiNDWCAFT.

Family and domain databases

HAMAPiMF_00032. eIF_6.
InterProiIPR002769. eIF6.
[Graphical view]
PANTHERiPTHR10784. PTHR10784. 1 hit.
PfamiPF01912. eIF-6. 1 hit.
[Graphical view]
PIRSFiPIRSF006413. IF-6. 1 hit.
SMARTiSM00654. eIF6. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00323. eIF-6. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UYI6-1 [UniParc]FASTAAdd to Basket

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MHIERLDFEN SPYLGVFGVA TDRVVLVREG LQEKKLEVIR EVLKVPVIEA    50
SIMKSRIIGT LATGNSNAIL VPWYVWDTEI ERIKSAFKEY GIETEIVPFR 100
TKYTALGNLI LTNDKAALVS AKFSRDEAKE IGDILGVEVE RGLIAGLHAV 150
GSAGVVTNKG GLVHPEASDE ELEWLSELFK VDVYVGTANM GVPYVGTCML 200
ANSNGVVVGH LTTGPEIVKI EEALGLI 227
Length:227
Mass (Da):24,693
Last modified:May 1, 2000 - v1
Checksum:i1C8F1D8C960F54FE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ248287 Genomic DNA. Translation: CAB50426.1.
HE613800 Genomic DNA. Translation: CCE70975.1.
PIRiE75066.
RefSeqiNP_127196.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50426; CAB50426; PAB1005.
GeneIDi1495804.
KEGGipab:PAB1005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ248287 Genomic DNA. Translation: CAB50426.1 .
HE613800 Genomic DNA. Translation: CCE70975.1 .
PIRi E75066.
RefSeqi NP_127196.1. NC_000868.1.

3D structure databases

ProteinModelPortali Q9UYI6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272844.PAB1005.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB50426 ; CAB50426 ; PAB1005 .
GeneIDi 1495804.
KEGGi pab:PAB1005.

Phylogenomic databases

eggNOGi COG1976.
HOGENOMi HOG000230604.
KOi K03264.
OMAi NDWCAFT.

Family and domain databases

HAMAPi MF_00032. eIF_6.
InterProi IPR002769. eIF6.
[Graphical view ]
PANTHERi PTHR10784. PTHR10784. 1 hit.
Pfami PF01912. eIF-6. 1 hit.
[Graphical view ]
PIRSFi PIRSF006413. IF-6. 1 hit.
SMARTi SM00654. eIF6. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00323. eIF-6. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GE5 / Orsay.
  2. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
    Gao J., Wang J.
    Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: GE5 / Orsay.

Entry informationi

Entry nameiIF6_PYRAB
AccessioniPrimary (citable) accession number: Q9UYI6
Secondary accession number(s): G8ZIU2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 21, 2001
Last sequence update: May 1, 2000
Last modified: May 14, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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