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Protein
Submitted name:

Complete genome; segment 6/6

Gene

tlpC

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Complete genome; segment 6/6Imported
Submitted name:
Methyl-accepting chemotaxis proteinImported
Gene namesi
Name:tlpCImported
ORF Names:PAB1336Imported
OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000000810 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB1336.

Structurei

3D structure databases

ProteinModelPortaliQ9UYF8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000078241.
KOiK03406.
OMAiRIEDIQH.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UYF8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQFRKKIILM AIMSAVITMA IFGGVTIYSF NKVYGVIKGE IQAPAIEQGG
60 70 80 90 100
QLAMSAAEVA EKMFDDFFAR VADYGTMATE VVKEAYAKGL DSNETAMREF
110 120 130 140 150
LLSEFKKIKE LNKDVSYVYF GDEEGHMYMY PPDELPEGYD PRVRPWYVQA
160 170 180 190 200
KEKGGAIITE PYRDAATGQW VITYAVPVYV NGQFKGVIGL DVFVSTLLNE
210 220 230 240 250
TKKIKLGKTG YIAIIDQNGM TLVHPNEEFI NKLNIFQVPE LKDLADELKK
260 270 280 290 300
GKDEGYVLYT FQGIKKIGGY KRLKTTGWIV VATVPLSDIT GPILSATDTA
310 320 330 340 350
INKMKMIVIQ GFAVGFVIIV AILVVIYKIA SNTLAPLEKL KYAAQALAEG
360 370 380 390 400
RLKQVSEYLK QIRYLERDEI GALIQAFEAV SKDLVGTLNA ISKKLERLAE
410 420 430 440 450
GDLSNGLTVE VRGELRDIIE DIRSVTETFR ESIGSLVEMA NDLEKRANAL
460 470 480 490 500
AQVSKDVTEA INQVNEAIQQ VSIEAQRQQE TINEITDGMR LVAQTSEESV
510 520 530 540 550
RAMEEFSGAV TEVVSIANEG SQKGDEALKR IEDIQHMMSR IEETVSKVAE
560 570 580 590 600
MSRNIEEITN VITSIAEQTN LLALNAAIEA ARAGEAGRGF AVVAQEIRKL
610 620 630 640 650
AEESKQAADN IKSIIDKITD EIKEAVEATK EGVSVIGESS ETLRDTIGYL
660 670 680 690 700
ANIATLLQET SERMTTVKEQ IVRTQEEVDK ALRALENLAA SAEETTASAE
710 720 730
EVSSAIEQQT AAIEELRRAA QELKDMVGRM RQIVGKFKV
Length:739
Mass (Da):81,592
Last modified:May 1, 2000 - v1
Checksum:iE02EA11AFCF838FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248288 Genomic DNA. Translation: CAB50454.1.
HE613800 Genomic DNA. Translation: CCE71004.1.
PIRiH75001.
RefSeqiNP_127224.1. NC_000868.1.
WP_010868667.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50454; CAB50454; PAB1336.
GeneIDi1495833.
KEGGipab:PAB1336.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248288 Genomic DNA. Translation: CAB50454.1.
HE613800 Genomic DNA. Translation: CCE71004.1.
PIRiH75001.
RefSeqiNP_127224.1. NC_000868.1.
WP_010868667.1. NC_000868.1.

3D structure databases

ProteinModelPortaliQ9UYF8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB1336.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB50454; CAB50454; PAB1336.
GeneIDi1495833.
KEGGipab:PAB1336.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000078241.
KOiK03406.
OMAiRIEDIQH.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Genoscope
    Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  2. "Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes."
    Gaspin C., Cavaille J., Erauso G.
    J. Mol. Biol. 297:895-906(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  3. "Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea."
    Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J., Thierry J.C., Poch O.
    Genome Res. 11:981-993(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: OrsayImported.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GE5 / OrsayImported and OrsayImported.
  5. "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and Pyrococcus furiosus DSM 3638."
    Gao J., Wang J.
    Curr. Microbiol. 64:118-129(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: GE5Imported and GE5 / OrsayImported.

Entry informationi

Entry nameiQ9UYF8_PYRAB
AccessioniPrimary (citable) accession number: Q9UYF8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 27, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.