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Protein
Submitted name:

Methyl-accepting chemotaxis related protein

Gene

PAB1308

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis related proteinImported
Gene namesi
ORF Names:PAB1308Imported
OrganismiPyrococcus abyssi (strain GE5 / Orsay)Imported
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2721HelicalSequence analysisAdd
BLAST
Transmembranei33 – 4917HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB1308.

Structurei

3D structure databases

ProteinModelPortaliQ9UYB8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini136 – 393258Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili54 – 8128Sequence analysisAdd
BLAST
Coiled coili144 – 17128Sequence analysisAdd
BLAST
Coiled coili277 – 30024Sequence analysisAdd
BLAST
Coiled coili333 – 36028Sequence analysisAdd
BLAST
Coiled coili365 – 41652Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000078162.
KOiK03406.
OMAiIMEISAG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UYB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGGAMVRVT IITPVIPFVL TVIPAVFNSI PGAIVGGIVG VGIASYINYK
60 70 80 90 100
GETKVKVSAD IEEYEKQLQR EIDEIVKILD RIAQGDLSVE DKEIGGMGAK
110 120 130 140 150
VRQGIEDLRK SISQLVLNIK NAAIDVRNHT KVMKENIEQV ADSVQQVAEA
160 170 180 190 200
INQVSIEAQR EQENISKMTD TMRYIHDISK ETVSTMEEFE ASMREMAQLA
210 220 230 240 250
KEGGEKGRQA ADQIEEISRM MEKIEETVRG VAEMGKSIEN ITNVISSISE
260 270 280 290 300
QTNLLALNAA IEAARAGEAG KGFAVVADEI RKLAEESKKA AEDIRELIKQ
310 320 330 340 350
IGDKIGESVE VTQQGAEVVK TSTEVIKESV SYLTQVAEMM EEMEVKASEL
360 370 380 390 400
REKVIQEGEK IEEGLRFLEN LAASAEETTA AAEEVSAAAE EQSSALQELR
410 420 430
ESVKELDRLV DVLMEQISKF KLSKDHESQV KKITA
Length:435
Mass (Da):47,725
Last modified:May 1, 2000 - v1
Checksum:i521ADA1CF20A1302
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248288 Genomic DNA. Translation: CAB50494.1.
PIRiH75006.

Genome annotation databases

EnsemblBacteriaiCAB50494; CAB50494; PAB1308.
KEGGipab:PAB1308.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248288 Genomic DNA. Translation: CAB50494.1.
PIRiH75006.

3D structure databases

ProteinModelPortaliQ9UYB8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272844.PAB1308.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB50494; CAB50494; PAB1308.
KEGGipab:PAB1308.

Phylogenomic databases

eggNOGiarCOG02320. Archaea.
COG0840. LUCA.
HOGENOMiHOG000078162.
KOiK03406.
OMAiIMEISAG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GE5 / OrsayImported.

Entry informationi

Entry nameiQ9UYB8_PYRAB
AccessioniPrimary (citable) accession number: Q9UYB8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: March 16, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.