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Protein

30S ribosomal protein S24e

Gene

rps24e

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S24eUniRule annotation
Gene namesi
Name:rps24eUniRule annotation
Ordered Locus Names:PYRAB16880
ORF Names:PAB3419
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001376501 – 9930S ribosomal protein S24eAdd BLAST99

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB3419.

Structurei

Secondary structure

199
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 11Combined sources10
Turni12 – 15Combined sources4
Beta strandi16 – 24Combined sources9
Helixi33 – 44Combined sources12
Helixi48 – 50Combined sources3
Beta strandi51 – 57Combined sources7
Beta strandi63 – 74Combined sources12
Helixi75 – 81Combined sources7
Helixi84 – 89Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2V94X-ray1.90A/B1-99[»]
ProteinModelPortaliQ9UY20.
SMRiQ9UY20.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9UY20.

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS24 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04182. Archaea.
COG2004. LUCA.
HOGENOMiHOG000223076.
KOiK02974.
OMAiQYIRSYF.
OrthoDBiPOG093Z0KLW.

Family and domain databases

HAMAPiMF_00545. Ribosomal_S24e. 1 hit.
InterProiView protein in InterPro
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001976. Ribosomal_S24e.
IPR018098. Ribosomal_S24e_CS.
PANTHERiPTHR10496. PTHR10496. 1 hit.
PfamiView protein in Pfam
PF01282. Ribosomal_S24e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD006052. Ribosomal_S24e. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS00529. RIBOSOMAL_S24E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UY20-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIKITEVKE NKLIGRKEIY FEIYHPGEPT PSRKDVKGKL VAMLDLNPET
60 70 80 90
TVIQYIRSYF GSYKSKGYAK YYYDKDRMLY IEPEYILIRD GIIEKKEGE
Length:99
Mass (Da):11,780
Last modified:May 1, 2000 - v1
Checksum:i95E3BA496BB11567
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248288 Genomic DNA. Translation: CAB50592.1.
HE613800 Genomic DNA. Translation: CCE71156.1.
PIRiB75019.
RefSeqiWP_010868806.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50592; CAB50592; PAB3419.
GeneIDi1495985.
KEGGipab:PAB3419.
PATRICifig|272844.11.peg.1802.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS24_PYRAB
AccessioniPrimary (citable) accession number: Q9UY20
Secondary accession number(s): G8ZK49
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: May 1, 2000
Last modified: June 7, 2017
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families