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Protein

30S ribosomal protein S27e

Gene

rps27e

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Zn2+CuratedNote: Binds 1 zinc ion per subunit.Curated

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri20 – 42C4-typeSequence analysisAdd BLAST23

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S27e
Gene namesi
Name:rps27e
Ordered Locus Names:PYRAB17140
ORF Names:PAB7435
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001490761 – 6530S ribosomal protein S27eAdd BLAST65

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB7435.

Structurei

3D structure databases

ProteinModelPortaliQ9UXZ3.
SMRiQ9UXZ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri20 – 42C4-typeSequence analysisAdd BLAST23

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiarCOG04108. Archaea.
COG2051. LUCA.
HOGENOMiHOG000224976.
KOiK02978.
OMAiDCENEQV.
OrthoDBiPOG093Z0MLM.

Family and domain databases

Gene3Di2.20.25.100. 1 hit.
HAMAPiMF_00371. Ribosomal_S27e. 1 hit.
InterProiView protein in InterPro
IPR000592. Ribosomal_S27e.
IPR023407. Ribosomal_S27e_Zn-bd_dom.
IPR011332. Ribosomal_zn-bd.
PANTHERiPTHR11594. PTHR11594. 1 hit.
PfamiView protein in Pfam
PF01667. Ribosomal_S27e. 1 hit.
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiView protein in PROSITE
PS01168. RIBOSOMAL_S27E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UXZ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALPRNVIPM PRSRFLRVKC IDCGNEQIVF SHPATRVRCN VCGATLVEPT
60
GGKGIIRAKI LEVLE
Length:65
Mass (Da):7,176
Last modified:May 1, 2000 - v1
Checksum:i56C7E39AC8670AC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248288 Genomic DNA. Translation: CAB50619.1.
HE613800 Genomic DNA. Translation: CCE71186.1.
PIRiE75022.
RefSeqiWP_048147173.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB50619; CAB50619; PAB7435.
GeneIDi1496015.
KEGGipab:PAB7435.
PATRICifig|272844.11.peg.1831.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS27_PYRAB
AccessioniPrimary (citable) accession number: Q9UXZ3
Secondary accession number(s): G8ZK79
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: May 1, 2000
Last modified: June 7, 2017
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families